RNA–Protein interactions for RNA: ENST00000483448.1

SYPL1-206, Transcript of synaptophysin like 1, humanhuman

TSL 4

Gene SYPL1, Length 478 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-206ENST00000483448 SAMD1Q6SPF0 538 aaPredicted RBP25.77■■□□□ 1.72
SYPL1-206ENST00000483448 SPICE1Q8N0Z3 855 aa25.77■■□□□ 1.72
SYPL1-206ENST00000483448 DPF3Q92784 378 aa25.77■■□□□ 1.72
SYPL1-206ENST00000483448 TMX2Q9Y320 296 aa25.77■■□□□ 1.72
SYPL1-206ENST00000483448 SPDYE16A6NNV3 312 aaPredicted RBP25.76■■□□□ 1.71
SYPL1-206ENST00000483448 RAD21O60216 631 aa25.76■■□□□ 1.71
SYPL1-206ENST00000483448 RGS2P41220 211 aa25.76■■□□□ 1.71
SYPL1-206ENST00000483448 TRIM32Q13049 653 aa25.76■■□□□ 1.71
SYPL1-206ENST00000483448 HDAC1Q13547 482 aaPredicted RBP25.76■■□□□ 1.71
SYPL1-206ENST00000483448 SIAH1Q8IUQ4 282 aa25.76■■□□□ 1.71
SYPL1-206ENST00000483448 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.76■■□□□ 1.71
SYPL1-206ENST00000483448 KANSL2Q9H9L4 492 aa25.76■■□□□ 1.71
SYPL1-206ENST00000483448 HMX1Q9NP08 348 aaPredicted RBP25.76■■□□□ 1.71
SYPL1-206ENST00000483448 BTBD7Q9P203 1132 aa25.76■■□□□ 1.71
SYPL1-206ENST00000483448 PATL2C9JE40 543 aaKnown RBP25.75■■□□□ 1.71
SYPL1-206ENST00000483448 FARP2O94887 1054 aaPredicted RBP25.75■■□□□ 1.71
SYPL1-206ENST00000483448 XRCC5P13010 732 aaKnown RBP25.75■■□□□ 1.71
SYPL1-206ENST00000483448 EEF2P13639 858 aaKnown RBP25.75■■□□□ 1.71
SYPL1-206ENST00000483448 KIAA1755Q5JYT7 1200 aa25.75■■□□□ 1.71
SYPL1-206ENST00000483448 LBX2Q6XYB7 198 aa25.75■■□□□ 1.71
SYPL1-206ENST00000483448 TRMT44Q8IYL2 757 aaKnown RBP25.75■■□□□ 1.71
SYPL1-206ENST00000483448 TRIB2Q92519 343 aa25.75■■□□□ 1.71
SYPL1-206ENST00000483448 LPAR1Q92633 364 aa25.75■■□□□ 1.71
SYPL1-206ENST00000483448 VCPKMTQ9H867 229 aa25.75■■□□□ 1.71
SYPL1-206ENST00000483448 RPTORQ8N122 1335 aa25.74■■□□□ 1.71
SYPL1-206ENST00000483448 ZKSCAN1P17029 563 aaPredicted RBP25.74■■□□□ 1.71
SYPL1-206ENST00000483448 SEC62Q99442 399 aaKnown RBP25.74■■□□□ 1.71
SYPL1-206ENST00000483448 NACAP1Q9BZK3 213 aa25.74■■□□□ 1.71
SYPL1-206ENST00000483448 PAK6Q9NQU5 681 aaPredicted RBP25.74■■□□□ 1.71
SYPL1-206ENST00000483448 IVNS1ABPQ9Y6Y0 642 aa25.74■■□□□ 1.71
SYPL1-206ENST00000483448 BRCA2P51587 3418 aa25.73■■□□□ 1.71
SYPL1-206ENST00000483448 FLOT1O75955 427 aa25.73■■□□□ 1.71
SYPL1-206ENST00000483448 AAMPQ13685 434 aa25.73■■□□□ 1.71
SYPL1-206ENST00000483448 MORN1Q5T089 497 aa25.73■■□□□ 1.71
SYPL1-206ENST00000483448 HTATIP2Q9BUP3 242 aa25.73■■□□□ 1.71
SYPL1-206ENST00000483448 CAPN2P17655 700 aa25.72■■□□□ 1.71
SYPL1-206ENST00000483448 MAP2K5Q13163 448 aa25.72■■□□□ 1.71
SYPL1-206ENST00000483448 IFNL3Q8IZI9 196 aa25.72■■□□□ 1.71
SYPL1-206ENST00000483448 ZNF444Q8N0Y2 327 aaPredicted RBP25.72■■□□□ 1.71
SYPL1-206ENST00000483448 USP6NLQ92738 828 aa25.72■■□□□ 1.71
SYPL1-206ENST00000483448 RWDD1Q9H446 243 aaPredicted RBP25.72■■□□□ 1.71
SYPL1-206ENST00000483448 ZNF287Q9HBT7 754 aa25.72■■□□□ 1.71
SYPL1-206ENST00000483448 MYH8P13535 1937 aa25.72■■□□□ 1.71
SYPL1-206ENST00000483448 SLC15A5A6NIM6 579 aa25.71■■□□□ 1.71
SYPL1-206ENST00000483448 DSG3P32926 999 aa25.71■■□□□ 1.71
SYPL1-206ENST00000483448 PLS1Q14651 629 aa25.71■■□□□ 1.71
SYPL1-206ENST00000483448 APBA2Q99767 749 aa25.71■■□□□ 1.71
SYPL1-206ENST00000483448 EPB41L4AQ9HCS5 686 aaPredicted RBP25.71■■□□□ 1.71
SYPL1-206ENST00000483448 GOPCQ9HD26 462 aa25.71■■□□□ 1.71
SYPL1-206ENST00000483448 MKI67P46013 3256 aaKnown RBP25.71■■□□□ 1.71
SYPL1-206ENST00000483448 WDR46O15213 610 aaKnown RBP25.7■■□□□ 1.7
SYPL1-206ENST00000483448 PRKAR2AP13861 404 aaKnown RBP25.7■■□□□ 1.7
SYPL1-206ENST00000483448 RASA1P20936 1047 aa25.7■■□□□ 1.7
SYPL1-206ENST00000483448 PTPREP23469 700 aa25.7■■□□□ 1.7
SYPL1-206ENST00000483448 CCL14Q16627 93 aa25.7■■□□□ 1.7
SYPL1-206ENST00000483448 ZMYM1Q5SVZ6 1142 aa25.7■■□□□ 1.7
SYPL1-206ENST00000483448 PDE1AP54750 535 aa25.69■■□□□ 1.7
SYPL1-206ENST00000483448 UBE2Q1Q7Z7E8 422 aa25.69■■□□□ 1.7
SYPL1-206ENST00000483448 MB21D1Q8N884 522 aa25.69■■□□□ 1.7
SYPL1-206ENST00000483448 MOV10L1Q9BXT6 1211 aaKnown RBP25.69■■□□□ 1.7
SYPL1-206ENST00000483448 SPATC1LQ9H0A9 340 aa25.69■■□□□ 1.7
SYPL1-206ENST00000483448 CRISPLD2Q9H0B8 497 aa25.69■■□□□ 1.7
SYPL1-206ENST00000483448 NAPBQ9H115 298 aa25.69■■□□□ 1.7
SYPL1-206ENST00000483448 STAP2Q9UGK3 403 aa25.69■■□□□ 1.7
SYPL1-206ENST00000483448 PLXNB2O15031 1838 aa25.69■■□□□ 1.7
SYPL1-206ENST00000483448 SALL3Q9BXA9 1300 aa25.68■■□□□ 1.7
SYPL1-206ENST00000483448 PRDM1O75626 825 aa25.68■■□□□ 1.7
SYPL1-206ENST00000483448 CACNB2Q08289 660 aaPredicted RBP25.68■■□□□ 1.7
SYPL1-206ENST00000483448 B4GALNT3Q6L9W6 998 aa25.68■■□□□ 1.7
SYPL1-206ENST00000483448 EVI5LQ96CN4 794 aa25.68■■□□□ 1.7
SYPL1-206ENST00000483448 ATG4CQ96DT6 458 aa25.68■■□□□ 1.7
SYPL1-206ENST00000483448 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.68■■□□□ 1.7
SYPL1-206ENST00000483448 LNPKQ9C0E8 428 aa25.68■■□□□ 1.7
SYPL1-206ENST00000483448 H0YGN5 161 aa25.67■■□□□ 1.7
SYPL1-206ENST00000483448 SLC3A2P08195 630 aaKnown RBP25.67■■□□□ 1.7
SYPL1-206ENST00000483448 MFSD14CQ5VZR4 134 aa25.67■■□□□ 1.7
SYPL1-206ENST00000483448 DPP9Q86TI2 863 aa25.67■■□□□ 1.7
SYPL1-206ENST00000483448 CLIP2Q9UDT6 1046 aa25.67■■□□□ 1.7
SYPL1-206ENST00000483448 CCDC129Q6ZRS4 1044 aa25.66■■□□□ 1.7
SYPL1-206ENST00000483448 NCAPG2Q86XI2 1143 aa25.66■■□□□ 1.7
SYPL1-206ENST00000483448 EXOC6Q8TAG9 804 aa25.66■■□□□ 1.7
SYPL1-206ENST00000483448 PAWRQ96IZ0 340 aaKnown RBP25.66■■□□□ 1.7
SYPL1-206ENST00000483448 ROBO3Q96MS0 1386 aa25.66■■□□□ 1.7
SYPL1-206ENST00000483448 ERCC3P19447 782 aa25.65■■□□□ 1.7
SYPL1-206ENST00000483448 PDE4BQ07343 736 aa25.65■■□□□ 1.7
SYPL1-206ENST00000483448 GRB14Q14449 540 aa25.65■■□□□ 1.7
SYPL1-206ENST00000483448 FAM83BQ5T0W9 1011 aa25.65■■□□□ 1.7
SYPL1-206ENST00000483448 MAP3K21Q5TCX8 1036 aa25.65■■□□□ 1.7
SYPL1-206ENST00000483448 NECAB2Q7Z6G3 386 aa25.65■■□□□ 1.7
SYPL1-206ENST00000483448 NYAP2Q9P242 653 aa25.65■■□□□ 1.7
SYPL1-206ENST00000483448 STRNO43815 780 aa25.64■■□□□ 1.7
SYPL1-206ENST00000483448 SHCBP1Q8NEM2 672 aa25.64■■□□□ 1.7
SYPL1-206ENST00000483448 FBXO28Q9NVF7 368 aa25.64■■□□□ 1.7
SYPL1-206ENST00000483448 NR2E3Q9Y5X4 410 aa25.64■■□□□ 1.7
SYPL1-206ENST00000483448 TRIM6-TRIM34B2RNG4 842 aa25.63■■□□□ 1.69
SYPL1-206ENST00000483448 CCND3P30281 292 aaPredicted RBP25.63■■□□□ 1.69
SYPL1-206ENST00000483448 PPARAQ07869 468 aa25.63■■□□□ 1.69
SYPL1-206ENST00000483448 ANKLE1Q8NAG6 615 aa25.63■■□□□ 1.69
SYPL1-206ENST00000483448 NPLOC4Q8TAT6 608 aa25.63■■□□□ 1.69
SYPL1-206ENST00000483448 DIS3LQ8TF46 1054 aaKnown RBP25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms