RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TMEM47Q9BQJ4 181 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 C22orf23Q9BZE7 217 aa20.97■□□□□ 0.95
CPNE1-224ENST00000483359 UPF3BQ9BZI7 483 aaKnown RBP20.97■□□□□ 0.95
CPNE1-224ENST00000483359 GPHNQ9NQX3 736 aaPredicted RBP20.97■□□□□ 0.95
CPNE1-224ENST00000483359 ERICH2A1L162 156 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 C19orf81C9J6K1 198 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 IGF2BP3O00425 579 aaKnown RBP eCLIP20.96■□□□□ 0.952e-7■■■■□ 20.3
CPNE1-224ENST00000483359 USP14P54578 494 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 SART3Q15020 963 aaKnown RBP20.96■□□□□ 0.95
CPNE1-224ENST00000483359 BLOC1S2Q6QNY1 142 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 USP17L2Q6R6M4 530 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 VCPKMTQ9H867 229 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 MAP2K2P36507 400 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 TMEM67Q5HYA8 995 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 SH3D19Q5HYK7 790 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 IFIT1BQ5T764 474 aaKnown RBP20.96■□□□□ 0.95
CPNE1-224ENST00000483359 FAM43AQ8N2R8 423 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 SENP2Q9HC62 589 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 GOPCQ9HD26 462 aa20.96■□□□□ 0.95
CPNE1-224ENST00000483359 BTBD19C9JJ37 291 aa20.95■□□□□ 0.94
CPNE1-224ENST00000483359 VCAM1P19320 739 aa20.95■□□□□ 0.94
CPNE1-224ENST00000483359 PSMA5P28066 241 aa20.95■□□□□ 0.94
CPNE1-224ENST00000483359 PPP4R3BQ5MIZ7 849 aa20.95■□□□□ 0.94
CPNE1-224ENST00000483359 DHX32Q7L7V1 743 aaKnown RBP20.95■□□□□ 0.94
CPNE1-224ENST00000483359 FASTKD5Q7L8L6 764 aaKnown RBP20.95■□□□□ 0.94
CPNE1-224ENST00000483359 ISY1Q9ULR0 285 aaKnown RBP20.95■□□□□ 0.94
CPNE1-224ENST00000483359 F5H6K3 240 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 TOP1P11387 765 aaKnown RBP20.94■□□□□ 0.94
CPNE1-224ENST00000483359 NOVP48745 357 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 KLRC3Q07444 240 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 WTAPQ15007 396 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 SEC23AQ15436 765 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 DGKHQ86XP1 1220 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 IFNL1Q8IU54 200 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 PROCA1Q8NCQ7 364 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-224ENST00000483359 MKL1Q969V6 931 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 NUP88Q99567 741 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-224ENST00000483359 KAT14Q9H8E8 782 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 TESPA1A2RU30 521 aaPredicted RBP20.94■□□□□ 0.94
CPNE1-224ENST00000483359 NDUFB10O96000 172 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 HMGB1P09429 215 aaKnown RBP20.94■□□□□ 0.94
CPNE1-224ENST00000483359 ANAPC15P60006 121 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 CCDC178Q5BJE1 867 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 TTC14Q96N46 770 aa20.94■□□□□ 0.94
CPNE1-224ENST00000483359 RPS6KB1P23443 525 aa20.93■□□□□ 0.94
CPNE1-224ENST00000483359 GPAT2Q6NUI2 795 aa20.93■□□□□ 0.94
CPNE1-224ENST00000483359 IGDCC4Q8TDY8 1250 aa20.93■□□□□ 0.94
CPNE1-224ENST00000483359 C12orf42Q96LP6 360 aa20.93■□□□□ 0.94
CPNE1-224ENST00000483359 AGTPBP1Q9UPW5 1226 aa20.93■□□□□ 0.94
CPNE1-224ENST00000483359 SH2B2O14492 632 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-224ENST00000483359 TM4SF4P48230 202 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 INHBEP58166 350 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 FGD1P98174 961 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 EXOSC10Q01780 885 aaKnown RBP20.92■□□□□ 0.94
CPNE1-224ENST00000483359 PNMA1Q8ND90 353 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 RPAP3Q9H6T3 665 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-224ENST00000483359 LY9Q9HBG7 655 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 PDHXO00330 501 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 FAM83BQ5T0W9 1011 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 SLFN13Q68D06 897 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 SAMD1Q6SPF0 538 aaPredicted RBP20.92■□□□□ 0.94
CPNE1-224ENST00000483359 RUFY3Q7L099 469 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 LPAR1Q92633 364 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 TMEM87BQ96K49 555 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 TANGO6Q9C0B7 1094 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 ZSWIM6Q9HCJ5 1215 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 CYP46A1Q9Y6A2 500 aa20.92■□□□□ 0.94
CPNE1-224ENST00000483359 NFXL1Q6ZNB6 911 aa20.91■□□□□ 0.94
CPNE1-224ENST00000483359 GMCL1P1Q8NEA9 526 aa20.91■□□□□ 0.94
CPNE1-224ENST00000483359 Q6ZUG5 572 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 ANKRD23Q86SG2 305 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 CYP2C8P10632 490 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 SLC1A4P43007 532 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 RBM25P49756 843 aaKnown RBP20.9■□□□□ 0.94
CPNE1-224ENST00000483359 CCDC96Q2M329 555 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 RAB11FIP4Q86YS3 637 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 ANKS1AQ92625 1134 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 MYL10Q9BUA6 226 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 TM6SF1Q9BZW5 370 aa20.9■□□□□ 0.94
CPNE1-224ENST00000483359 FRMPD2Q68DX3 1309 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-224ENST00000483359 WDR19Q8NEZ3 1342 aa20.89■□□□□ 0.93
CPNE1-224ENST00000483359 WDR46O15213 610 aaKnown RBP20.89■□□□□ 0.93
CPNE1-224ENST00000483359 OTUD7BQ6GQQ9 843 aa20.89■□□□□ 0.93
CPNE1-224ENST00000483359 KCTD1Q719H9 257 aa20.89■□□□□ 0.93
CPNE1-224ENST00000483359 REM2Q8IYK8 340 aaPredicted RBP20.89■□□□□ 0.93
CPNE1-224ENST00000483359 TBC1D32Q96NH3 1257 aa20.89■□□□□ 0.93
CPNE1-224ENST00000483359 SYNPO2Q9UMS6 1093 aa20.89■□□□□ 0.93
CPNE1-224ENST00000483359 CCDC69A6NI79 296 aa20.88■□□□□ 0.93
CPNE1-224ENST00000483359 IRX3P78415 501 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-224ENST00000483359 TAF1CQ15572 869 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-224ENST00000483359 TRPA1O75762 1119 aa20.88■□□□□ 0.93
CPNE1-224ENST00000483359 PDHBP11177 359 aa20.88■□□□□ 0.93
CPNE1-224ENST00000483359 BRF1Q92994 677 aa20.88■□□□□ 0.93
CPNE1-224ENST00000483359 KIF2CQ99661 725 aa20.88■□□□□ 0.93
CPNE1-224ENST00000483359 MTA3Q9BTC8 594 aa20.88■□□□□ 0.93
CPNE1-224ENST00000483359 ASCC2Q9H1I8 757 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-224ENST00000483359 NAP1L2Q9ULW6 460 aaPredicted RBP20.88■□□□□ 0.93
CPNE1-224ENST00000483359 USP17L15C9J2P7 530 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 USP17L13C9JLJ4 530 aa20.87■□□□□ 0.93
CPNE1-224ENST00000483359 USP17L11C9JVI0 530 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms