RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 LUC7L3O95232 432 aaKnown RBP8.74□□□□□ -1.01
COL4A5-205ENST00000483338 NPTXRO95502 500 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 NNTQ13423 1086 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 INF2Q27J81 1249 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 LMOD2Q6P5Q4 547 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 C8orf58Q8NAV2 365 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 CCHCR1Q8TD31 782 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 KCNV2Q8TDN2 545 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 PANK4Q9NVE7 773 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 FAM184BQ9ULE4 1060 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 PABPC4Q13310 644 aaKnown RBP eCLIP8.74□□□□□ -1.01
COL4A5-205ENST00000483338 ADAM9Q13443 819 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 BYSLQ13895 437 aaKnown RBP8.74□□□□□ -1.01
COL4A5-205ENST00000483338 ENOX2Q16206 610 aaKnown RBP8.74□□□□□ -1.01
COL4A5-205ENST00000483338 CDC37Q16543 378 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-205ENST00000483338 TSEN2Q8NCE0 465 aaKnown RBP8.74□□□□□ -1.01
COL4A5-205ENST00000483338 MAIP1Q8WWC4 291 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 NECTIN2Q92692 538 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 BRF1Q92994 677 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 HVCN1Q96D96 273 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 TM6SF1Q9BZW5 370 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 NDST4Q9H3R1 872 aa8.74□□□□□ -1.01
COL4A5-205ENST00000483338 LRRD1A4D1F6 860 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 JAK2O60674 1132 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 CLTAP09496 248 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 NDUFA8P51970 172 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 MAP3K12Q12852 859 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 QPCTQ16769 361 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 TMEM110Q86TL2 294 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 TAX1BP1Q86VP1 789 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 CNBD1Q8NA66 436 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 USP28Q96RU2 1077 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 LEMD3Q9Y2U8 911 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 TMEM221A6NGB7 291 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 PPIP5K2O43314 1243 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 MDH1P40925 334 aaKnown RBP8.73□□□□□ -1.01
COL4A5-205ENST00000483338 ME1P48163 572 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 PTH1RQ03431 593 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 EHBP1Q8NDI1 1231 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 CCT6BQ92526 530 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 MBIPQ9NS73 344 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 TBC1D7Q9P0N9 293 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 BZW2Q9Y6E2 419 aaKnown RBP8.73□□□□□ -1.01
COL4A5-205ENST00000483338 UBN2Q6ZU65 1347 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 SH3TC1Q8TE82 1336 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 KRT14P02533 472 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 FUT4P22083 530 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 POLE2P56282 527 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 ANKRD20A2Q5SQ80 823 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 ZMYM1Q5SVZ6 1142 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 ANKRD20A1Q5TYW2 823 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 EMC10Q5UCC4 262 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 ANKRD20A3Q5VUR7 823 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 ALS2CLQ60I27 953 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 SPECC1LQ69YQ0 1117 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 MAEAQ7L5Y9 396 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 PNMA8AQ86V59 439 aaPredicted RBP8.73□□□□□ -1.01
COL4A5-205ENST00000483338 TCEANC2Q96MN5 208 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 SYT15Q9BQS2 421 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 KIF1BO60333 1816 aa8.73□□□□□ -1.01
COL4A5-205ENST00000483338 DIAPH1O60610 1272 aaKnown RBP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 E2F6O75461 281 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 MYL5Q02045 173 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 STK3Q13188 491 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 DYNC1I2Q13409 638 aaKnown RBP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 HSP90AA4PQ58FG1 418 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 ANO7Q6IWH7 933 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 MRPS27Q92552 414 aaKnown RBP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 C8orf76Q96K31 380 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 ARHGEF10LQ9HCE6 1279 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 USP32Q8NFA0 1604 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 COL3A1P02461 1466 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 SLC3A2P08195 630 aaKnown RBP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 PRPF4BQ13523 1007 aaKnown RBP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 RASGRP2Q7LDG7 609 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 PPANQ9NQ55 473 aaKnown RBP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 SPATA31D1Q6ZQQ2 1576 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 F8VZ95 297 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 EVI5O60447 810 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 ALADP13716 330 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 DESP17661 470 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 NR1D1P20393 614 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 SLC7A5Q01650 507 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 BTG3Q14201 252 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 CCDC38Q502W7 563 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 TRAPPC11Q7Z392 1133 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 SPICE1Q8N0Z3 855 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 SEC16BQ96JE7 1060 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 FAM81BQ96LP2 452 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 CORO1BQ9BR76 489 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 CDK19Q9BWU1 502 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL4A5-205ENST00000483338 PCDHA7Q9UN72 937 aa8.72□□□□□ -1.01
COL4A5-205ENST00000483338 METP08581 1390 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 ABCC6O95255 1503 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 SRRM3A6NNA2 597 aaPredicted RBP8.71□□□□□ -1.01
COL4A5-205ENST00000483338 RAB11FIP3O75154 756 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 ATF3P18847 181 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 BPIFB4P59827 614 aa8.71□□□□□ -1.01
COL4A5-205ENST00000483338 MAATS1Q7Z4T9 603 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms