RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 CAGE1Q8TC20 777 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 JAKMIP2Q96AA8 810 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 FAM184BQ9ULE4 1060 aa13.29□□□□□ -0.28
VTI1A-205ENST00000483122 LTN1O94822 1766 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 BTBD18B2RXH4 712 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 HERVK_113P62684 666 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 MRPS25P82663 173 aaKnown RBP13.28□□□□□ -0.28
VTI1A-205ENST00000483122 NEDD9Q14511 834 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 WASHC4Q2M389 1173 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 B4GALNT4Q76KP1 1039 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 CYB5R4Q7L1T6 521 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 MICU3Q86XE3 530 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 ATXN2Q99700 1313 aaKnown RBP13.28□□□□□ -0.28
VTI1A-205ENST00000483122 A0A087X0B3 334 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 PPP1R3GB7ZBB8 358 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 N4BP3O15049 544 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 CHUKO15111 745 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 ATP1A2P50993 1020 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 SKOR1P84550 965 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 TRIM29Q14134 588 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 SH2D3CQ8N5H7 860 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 TSEN2Q8NCE0 465 aaKnown RBP13.28□□□□□ -0.28
VTI1A-205ENST00000483122 HDAC7Q8WUI4 952 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 N4BP2L2Q92802 583 aaPredicted RBP13.28□□□□□ -0.28
VTI1A-205ENST00000483122 MIEF2Q96C03 454 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 MYL10Q9BUA6 226 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 TAB2Q9NYJ8 693 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 PCDHB6Q9Y5E3 794 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 UBN2Q6ZU65 1347 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 RGPD2P0DJD1 1756 aa13.28□□□□□ -0.28
VTI1A-205ENST00000483122 MYO5AQ9Y4I1 1855 aaKnown RBP13.27□□□□□ -0.28
VTI1A-205ENST00000483122 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 GCP02774 474 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 IARSP41252 1262 aaKnown RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 PIP4K2AP48426 406 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 CKAP4Q07065 602 aaKnown RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 NTRK3Q16288 839 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 PREPLQ4J6C6 727 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 CCDC122Q5T0U0 273 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 ATG9AQ7Z3C6 839 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 NOSTRINQ8IVI9 506 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 AIDAQ96BJ3 306 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 CSRNP2Q9H175 543 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 HAUS4Q9H6D7 363 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 CTNND2Q9UQB3 1225 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 ATP5J2-PTCD1G3V325 749 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 PTCD1O75127 700 aaKnown RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 CDKL5O76039 1030 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 RDXP35241 583 aaKnown RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 ACTN3Q08043 901 aaPredicted RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 LMBR1LQ6UX01 489 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 RPGRIP1Q96KN7 1286 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 DMGDHQ9UI17 866 aaKnown RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 ANGEL1Q9UNK9 670 aaKnown RBP13.27□□□□□ -0.29
VTI1A-205ENST00000483122 KCNJ14Q9UNX9 436 aa13.27□□□□□ -0.29
VTI1A-205ENST00000483122 ZNF213O14771 459 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 SEMA3EO15041 775 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 ZEB2O60315 1214 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 BRD2P25440 801 aaKnown RBP13.26□□□□□ -0.29
VTI1A-205ENST00000483122 COPB1P53618 953 aaKnown RBP13.26□□□□□ -0.29
VTI1A-205ENST00000483122 FKBP4Q02790 459 aaKnown RBP eCLIP13.26□□□□□ -0.29
VTI1A-205ENST00000483122 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 KANK3Q6NY19 840 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 APOA5Q6Q788 366 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 CABLES1Q8TDN4 633 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 SLC26A6Q9BXS9 759 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 KLC4Q9NSK0 619 aa13.26□□□□□ -0.29
VTI1A-205ENST00000483122 FAM217BQ9NTX9 383 aaPredicted RBP13.26□□□□□ -0.29
VTI1A-205ENST00000483122 SH2B2O14492 632 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-205ENST00000483122 OPA1O60313 960 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 ECM2O94769 699 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-205ENST00000483122 GUCY1A2P33402 732 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 PPARAQ07869 468 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 KCTD16Q68DU8 428 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 TACO1Q9BSH4 297 aaKnown RBP13.25□□□□□ -0.29
VTI1A-205ENST00000483122 PUS7LQ9H0K6 701 aaKnown RBP13.25□□□□□ -0.29
VTI1A-205ENST00000483122 RCCD1A6NED2 376 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 NAP1L1P55209 391 aaKnown RBP13.25□□□□□ -0.29
VTI1A-205ENST00000483122 FKBP15Q5T1M5 1219 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 RNF187Q5TA31 235 aaPredicted RBP13.25□□□□□ -0.29
VTI1A-205ENST00000483122 NAA35Q5VZE5 725 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 LRRC1Q9BTT6 524 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 CENPHQ9H3R5 247 aa13.25□□□□□ -0.29
VTI1A-205ENST00000483122 LIMA1Q9UHB6 759 aaKnown RBP13.25□□□□□ -0.29
VTI1A-205ENST00000483122 AFDNP55196 1824 aaKnown RBP13.25□□□□□ -0.29
VTI1A-205ENST00000483122 A0A087WZG4 1122 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 SLC7A5Q01650 507 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 SLC39A6Q13433 755 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 C1orf141Q5JVX7 400 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 TBC1D10CQ8IV04 446 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 DIS3L2Q8IYB7 885 aaKnown RBP13.24□□□□□ -0.29
VTI1A-205ENST00000483122 PAGE5Q96GU1 130 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 FAXDC2Q96IV6 333 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 LACRTQ9GZZ8 138 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 VCPKMTQ9H867 229 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 VEZTQ9HBM0 779 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 ODF2LQ9ULJ1 636 aa13.24□□□□□ -0.29
VTI1A-205ENST00000483122 SRPRBQ9Y5M8 271 aaKnown RBP13.24□□□□□ -0.29
VTI1A-205ENST00000483122 WDR17Q8IZU2 1322 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms