RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 FAM209AQ5JX71 171 aa5.14□□□□□ -1.59
CLCC1-209ENST00000482889 TDRD10Q5VZ19 366 aaKnown RBP5.14□□□□□ -1.59
CLCC1-209ENST00000482889 RAVER1Q8IY67 606 aaKnown RBP5.14□□□□□ -1.59
CLCC1-209ENST00000482889 UBR7Q8N806 425 aa5.14□□□□□ -1.59
CLCC1-209ENST00000482889 ZNF513Q8N8E2 541 aaPredicted RBP5.14□□□□□ -1.59
CLCC1-209ENST00000482889 ZBTB38Q8NAP3 1195 aaPredicted RBP5.14□□□□□ -1.59
CLCC1-209ENST00000482889 ZCRB1Q8TBF4 217 aaKnown RBP5.14□□□□□ -1.59
CLCC1-209ENST00000482889 KISS1RQ969F8 398 aaPredicted RBP5.14□□□□□ -1.59
CLCC1-209ENST00000482889 KIF2CQ99661 725 aa5.14□□□□□ -1.59
CLCC1-209ENST00000482889 FAM83CQ9BQN1 747 aa5.14□□□□□ -1.59
CLCC1-209ENST00000482889 WNT10AQ9GZT5 417 aa5.14□□□□□ -1.59
CLCC1-209ENST00000482889 DISC1Q9NRI5 854 aa5.14□□□□□ -1.59
CLCC1-209ENST00000482889 G3BP2Q9UN86 482 aaKnown RBP5.14□□□□□ -1.59
CLCC1-209ENST00000482889 TACC3Q9Y6A5 838 aa5.14□□□□□ -1.59
CLCC1-209ENST00000482889 FAM83GA6ND36 823 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 TMPRSS2O15393 492 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 KCNQ2O43526 872 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 GAS2O43903 313 aaKnown RBP5.13□□□□□ -1.59
CLCC1-209ENST00000482889 IGLV1-40P01703 118 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 CAPNS1P04632 268 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 NEFMP07197 916 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 HNRNPUQ00839 825 aaKnown RBP eCLIP5.13□□□□□ -1.59
CLCC1-209ENST00000482889 TCEA2Q15560 299 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 GNPTABQ3T906 1256 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 TM4SF20Q53R12 229 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 ZMYM1Q5SVZ6 1142 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 ZBTB37Q5TC79 503 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 EEPD1Q7L9B9 569 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 THNSL2Q86YJ6 484 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 C12orf50Q8NA57 414 aaPredicted RBP5.13□□□□□ -1.59
CLCC1-209ENST00000482889 C2CD4AQ8NCU7 369 aaPredicted RBP5.13□□□□□ -1.59
CLCC1-209ENST00000482889 BAHD1Q8TBE0 780 aaPredicted RBP5.13□□□□□ -1.59
CLCC1-209ENST00000482889 KRTAP4-12Q9BQ66 201 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 DPH2Q9BQC3 489 aaPredicted RBP5.13□□□□□ -1.59
CLCC1-209ENST00000482889 IER2Q9BTL4 223 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 IRF2BPLQ9H1B7 796 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 SLKQ9H2G2 1235 aaPredicted RBP5.13□□□□□ -1.59
CLCC1-209ENST00000482889 GSX1Q9H4S2 264 aaPredicted RBP5.13□□□□□ -1.59
CLCC1-209ENST00000482889 C7orf69Q9H7B7 122 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 ARHGEF4Q9NR80 690 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 RNF112Q9ULX5 631 aa5.13□□□□□ -1.59
CLCC1-209ENST00000482889 IRS4O14654 1257 aaPredicted RBP5.12□□□□□ -1.59
CLCC1-209ENST00000482889 TBX1O43435 398 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 RAPGEF3O95398 923 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 ADH5P11766 374 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 SDSP20132 328 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 GRIA2P42262 883 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 SLC7A5Q01650 507 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 NFIAQ12857 509 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 PABPC4Q13310 644 aaKnown RBP eCLIP5.12□□□□□ -1.59
CLCC1-209ENST00000482889 NCAPHQ15003 741 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 AXDND1Q5T1B0 1012 aaPredicted RBP5.12□□□□□ -1.59
CLCC1-209ENST00000482889 RNF43Q68DV7 783 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 BEND4Q6ZU67 534 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 MCATQ8IVS2 390 aaKnown RBP5.12□□□□□ -1.59
CLCC1-209ENST00000482889 FAM13CQ8NE31 585 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 EZH1Q92800 747 aaPredicted RBP5.12□□□□□ -1.59
CLCC1-209ENST00000482889 ZNF669Q96BR6 464 aaPredicted RBP5.12□□□□□ -1.59
CLCC1-209ENST00000482889 TMEM87BQ96K49 555 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 ZNF512BQ96KM6 892 aaPredicted RBP5.12□□□□□ -1.59
CLCC1-209ENST00000482889 SLC6A18Q96N87 628 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 DBNDD2Q9BQY9 259 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 PHAXQ9H814 394 aaKnown RBP5.12□□□□□ -1.59
CLCC1-209ENST00000482889 SLC52A1Q9NWF4 448 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 APEX2Q9UBZ4 518 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 ADAM30Q9UKF2 790 aa5.12□□□□□ -1.59
CLCC1-209ENST00000482889 DRD2P14416 443 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 MAP4P27816 1152 aaKnown RBP5.11□□□□□ -1.59
CLCC1-209ENST00000482889 ETF1P62495 437 aaKnown RBP5.11□□□□□ -1.59
CLCC1-209ENST00000482889 PDE4BQ07343 736 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 SLBPQ14493 270 aaKnown RBP eCLIP5.11□□□□□ -1.59
CLCC1-209ENST00000482889 SGO2Q562F6 1265 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 TMEM67Q5HYA8 995 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 KRT26Q7Z3Y9 468 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 PRPF38AQ8NAV1 312 aaKnown RBP5.11□□□□□ -1.59
CLCC1-209ENST00000482889 ZSWIM2Q8NEG5 633 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 FGD4Q96M96 766 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 FANCD2OSQ96PS1 177 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 YIPF2Q9BWQ6 316 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 KRTAP9-9Q9BYP9 154 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 KRTAP9-4Q9BYQ2 154 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 KCNF1Q9H3M0 494 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 RAD18Q9NS91 495 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 CRIM1Q9NZV1 1036 aa5.11□□□□□ -1.59
CLCC1-209ENST00000482889 THRAP3Q9Y2W1 955 aaKnown RBP5.11□□□□□ -1.59
CLCC1-209ENST00000482889 COL17A1Q9UMD9 1497 aaPredicted RBP5.11□□□□□ -1.59
CLCC1-209ENST00000482889 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.1□□□□□ -1.59
CLCC1-209ENST00000482889 HMX2A2RU54 273 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 RGS13O14921 159 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 CBFA2T2O43439 604 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 EPHX1P07099 455 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 PDGFRBP09619 1106 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 MYCLP1P12525 358 aaPredicted RBP5.1□□□□□ -1.59
CLCC1-209ENST00000482889 RAG1P15918 1043 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 USP11P51784 963 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 PMS1P54277 932 aaKnown RBP5.1□□□□□ -1.59
CLCC1-209ENST00000482889 ERVK-24P63145 666 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 LRP8Q14114 963 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 SV2CQ496J9 727 aa5.1□□□□□ -1.59
CLCC1-209ENST00000482889 AKAP4Q5JQC9 854 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms