RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 HAND2P61296 217 aa21.8■■□□□ 1.08
SMIM4-204ENST00000482728 FAM47AQ5JRC9 791 aa21.8■■□□□ 1.08
SMIM4-204ENST00000482728 SPICE1Q8N0Z3 855 aa21.8■■□□□ 1.08
SMIM4-204ENST00000482728 TANGO6Q9C0B7 1094 aa21.8■■□□□ 1.08
SMIM4-204ENST00000482728 INCENPQ9NQS7 918 aa21.8■■□□□ 1.08
SMIM4-204ENST00000482728 NYAP2Q9P242 653 aa21.8■■□□□ 1.08
SMIM4-204ENST00000482728 CLIP2Q9UDT6 1046 aa21.8■■□□□ 1.08
SMIM4-204ENST00000482728 TSPY2A6NKD2 308 aa21.79■■□□□ 1.08
SMIM4-204ENST00000482728 ZNF213O14771 459 aa21.79■■□□□ 1.08
SMIM4-204ENST00000482728 PRMT2P55345 433 aa21.79■■□□□ 1.08
SMIM4-204ENST00000482728 GPRC5AQ8NFJ5 357 aa21.79■■□□□ 1.08
SMIM4-204ENST00000482728 DSCC1Q9BVC3 393 aa21.79■■□□□ 1.08
SMIM4-204ENST00000482728 HOXC10Q9NYD6 342 aa21.79■■□□□ 1.08
SMIM4-204ENST00000482728 CTNNA3Q9UI47 895 aa21.79■■□□□ 1.08
SMIM4-204ENST00000482728 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.79■■□□□ 1.08
SMIM4-204ENST00000482728 COG2Q14746 738 aa21.78■■□□□ 1.08
SMIM4-204ENST00000482728 RRP12Q5JTH9 1297 aaKnown RBP21.78■■□□□ 1.08
SMIM4-204ENST00000482728 PPP4R3BQ5MIZ7 849 aa21.78■■□□□ 1.08
SMIM4-204ENST00000482728 MFSD6Q6ZSS7 791 aa21.78■■□□□ 1.08
SMIM4-204ENST00000482728 CCAR1Q8IX12 1150 aaKnown RBP21.78■■□□□ 1.08
SMIM4-204ENST00000482728 CEP95Q96GE4 821 aa21.78■■□□□ 1.08
SMIM4-204ENST00000482728 PAGR1Q9BTK6 254 aa21.78■■□□□ 1.08
SMIM4-204ENST00000482728 MTMR4Q9NYA4 1195 aa21.78■■□□□ 1.08
SMIM4-204ENST00000482728 MORF4L1Q9UBU8 362 aa21.78■■□□□ 1.08
SMIM4-204ENST00000482728 RAD50Q92878 1312 aa21.78■■□□□ 1.08
SMIM4-204ENST00000482728 IGKV6D-41A0A0C4DH26 115 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 TNPO2O14787 897 aaKnown RBP21.77■■□□□ 1.08
SMIM4-204ENST00000482728 ORC4O43929 436 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 TTLL1O95922 423 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 CTGFP29279 349 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 KIAA1755Q5JYT7 1200 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 ERICH6BQ5W0A0 696 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 SKAP1Q86WV1 359 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 COA7Q96BR5 231 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 RNF41Q9H4P4 317 aaPredicted RBP21.77■■□□□ 1.08
SMIM4-204ENST00000482728 RBPJLQ9UBG7 517 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 SRRDQ9UH36 339 aa21.77■■□□□ 1.08
SMIM4-204ENST00000482728 WDR46O15213 610 aaKnown RBP21.76■■□□□ 1.07
SMIM4-204ENST00000482728 FGRP09769 529 aa21.76■■□□□ 1.07
SMIM4-204ENST00000482728 PCP11498 1178 aaKnown RBP21.76■■□□□ 1.07
SMIM4-204ENST00000482728 AKNAD1Q5T1N1 836 aa21.76■■□□□ 1.07
SMIM4-204ENST00000482728 RABGAP1Q9Y3P9 1069 aa21.76■■□□□ 1.07
SMIM4-204ENST00000482728 F5H6K3 240 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 FLOT1O75955 427 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 KLRC3Q07444 240 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 IMMTQ16891 758 aaKnown RBP21.75■■□□□ 1.07
SMIM4-204ENST00000482728 BMP2KLQ5H9B9 411 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 RAET1EQ8TD07 263 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 MKL1Q969V6 931 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 TXNRD2Q9NNW7 524 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 PPP4R2Q9NY27 417 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 PTCH2Q9Y6C5 1203 aa21.75■■□□□ 1.07
SMIM4-204ENST00000482728 ERVK-9P63128 1117 aa21.74■■□□□ 1.07
SMIM4-204ENST00000482728 ERVK-24P63145 666 aa21.74■■□□□ 1.07
SMIM4-204ENST00000482728 CCNA1P78396 465 aa21.74■■□□□ 1.07
SMIM4-204ENST00000482728 SAMD1Q6SPF0 538 aaPredicted RBP21.74■■□□□ 1.07
SMIM4-204ENST00000482728 NBPF11Q86T75 865 aa21.74■■□□□ 1.07
SMIM4-204ENST00000482728 STX8Q9UNK0 236 aa21.74■■□□□ 1.07
SMIM4-204ENST00000482728 TACC3Q9Y6A5 838 aa21.74■■□□□ 1.07
SMIM4-204ENST00000482728 MYPNQ86TC9 1320 aa21.74■■□□□ 1.07
SMIM4-204ENST00000482728 PLIN4Q96Q06 1357 aa21.74■■□□□ 1.07
SMIM4-204ENST00000482728 SPDYE16A6NNV3 312 aaPredicted RBP21.73■■□□□ 1.07
SMIM4-204ENST00000482728 PEX10O60683 326 aa21.73■■□□□ 1.07
SMIM4-204ENST00000482728 SLC9C1Q4G0N8 1177 aa21.73■■□□□ 1.07
SMIM4-204ENST00000482728 LBX2Q6XYB7 198 aa21.73■■□□□ 1.07
SMIM4-204ENST00000482728 KIAA1211Q6ZU35 1233 aa21.73■■□□□ 1.07
SMIM4-204ENST00000482728 STAG1Q8WVM7 1258 aa21.73■■□□□ 1.07
SMIM4-204ENST00000482728 IL25Q9H293 177 aa21.73■■□□□ 1.07
SMIM4-204ENST00000482728 CWC22Q9HCG8 908 aaKnown RBP21.73■■□□□ 1.07
SMIM4-204ENST00000482728 SYNPO2Q9UMS6 1093 aa21.73■■□□□ 1.07
SMIM4-204ENST00000482728 SGSM2O43147 1006 aa21.72■■□□□ 1.07
SMIM4-204ENST00000482728 NDUFB10O96000 172 aa21.72■■□□□ 1.07
SMIM4-204ENST00000482728 DSG3P32926 999 aa21.72■■□□□ 1.07
SMIM4-204ENST00000482728 PRKCZQ05513 592 aa21.72■■□□□ 1.07
SMIM4-204ENST00000482728 Q3C1V9 767 aa21.72■■□□□ 1.07
SMIM4-204ENST00000482728 FAM83BQ5T0W9 1011 aa21.72■■□□□ 1.07
SMIM4-204ENST00000482728 TBC1D10CQ8IV04 446 aa21.72■■□□□ 1.07
SMIM4-204ENST00000482728 LRRC47Q8N1G4 583 aaKnown RBP21.72■■□□□ 1.07
SMIM4-204ENST00000482728 IL17RBQ9NRM6 502 aa21.72■■□□□ 1.07
SMIM4-204ENST00000482728 GREB1LQ9C091 1923 aaPredicted RBP21.72■■□□□ 1.07
SMIM4-204ENST00000482728 NMT2O60551 498 aa21.71■■□□□ 1.07
SMIM4-204ENST00000482728 MAPK4P31152 587 aa21.71■■□□□ 1.07
SMIM4-204ENST00000482728 FLT3LGP49771 235 aa21.71■■□□□ 1.07
SMIM4-204ENST00000482728 MB21D1Q8N884 522 aa21.71■■□□□ 1.07
SMIM4-204ENST00000482728 ESR2Q92731 530 aa21.71■■□□□ 1.07
SMIM4-204ENST00000482728 NBPF3Q9H094 633 aa21.71■■□□□ 1.07
SMIM4-204ENST00000482728 ZSWIM8A7E2V4 1837 aa21.71■■□□□ 1.07
SMIM4-204ENST00000482728 DOCK3Q8IZD9 2030 aa21.7■■□□□ 1.06
SMIM4-204ENST00000482728 SLFN13Q68D06 897 aa21.7■■□□□ 1.06
SMIM4-204ENST00000482728 POTEEQ6S8J3 1075 aa21.7■■□□□ 1.06
SMIM4-204ENST00000482728 GMCL1P1Q8NEA9 526 aa21.7■■□□□ 1.06
SMIM4-204ENST00000482728 NUP88Q99567 741 aaPredicted RBP21.7■■□□□ 1.06
SMIM4-204ENST00000482728 BTBD7Q9P203 1132 aa21.7■■□□□ 1.06
SMIM4-204ENST00000482728 ISY1Q9ULR0 285 aaKnown RBP21.7■■□□□ 1.06
SMIM4-204ENST00000482728 GABRQQ9UN88 632 aa21.7■■□□□ 1.06
SMIM4-204ENST00000482728 U3KPZ7 1027 aaPredicted RBP21.7■■□□□ 1.06
SMIM4-204ENST00000482728 MGAMO43451 1857 aa21.7■■□□□ 1.06
SMIM4-204ENST00000482728 CNMDO75829 334 aa21.69■■□□□ 1.06
SMIM4-204ENST00000482728 NT5C2P49902 561 aa21.69■■□□□ 1.06
SMIM4-204ENST00000482728 PTH1RQ03431 593 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms