RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 MS4A4AQ96JQ5 239 aa18■□□□□ 0.47
CCM2-215ENST00000482714 ZKSCAN3Q9BRR0 538 aa18■□□□□ 0.47
CCM2-215ENST00000482714 AGXT2Q9BYV1 514 aa18■□□□□ 0.47
CCM2-215ENST00000482714 VCPKMTQ9H867 229 aa18■□□□□ 0.47
CCM2-215ENST00000482714 TMOD4Q9NZQ9 345 aa18■□□□□ 0.47
CCM2-215ENST00000482714 GREB1LQ9C091 1923 aaPredicted RBP17.99■□□□□ 0.47
CCM2-215ENST00000482714 F5H6K3 240 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 GJA5P36382 358 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 ATP2B2Q01814 1243 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 KLRC3Q07444 240 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 RABEP1Q15276 862 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 ANKRD1Q15327 319 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 CNKSR2Q8WXI2 1034 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 CAPNS2Q96L46 248 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 FEZ1Q99689 392 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 KAT14Q9H8E8 782 aa17.99■□□□□ 0.47
CCM2-215ENST00000482714 ZCCHC17Q9NP64 241 aaKnown RBP17.99■□□□□ 0.47
CCM2-215ENST00000482714 TRIM75PA6NK02 468 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 SH2B2O14492 632 aaPredicted RBP17.98■□□□□ 0.47
CCM2-215ENST00000482714 TM4SF4P48230 202 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 FGD1P98174 961 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 SREBF2Q12772 1141 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 CYP4F22Q6NT55 531 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 CHST3Q7LGC8 479 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 MAP3K14Q99558 947 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 KIF2CQ99661 725 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 EMILIN3Q9NT22 766 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 PDRG1Q9NUG6 133 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 SLC45A1Q9Y2W3 748 aa17.98■□□□□ 0.47
CCM2-215ENST00000482714 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
CCM2-215ENST00000482714 RCAN1P53805 252 aa17.97■□□□□ 0.47
CCM2-215ENST00000482714 EVCP57679 992 aa17.97■□□□□ 0.47
CCM2-215ENST00000482714 PABPC4Q13310 644 aaKnown RBP eCLIP17.97■□□□□ 0.47
CCM2-215ENST00000482714 MTMR2Q13614 643 aa17.97■□□□□ 0.47
CCM2-215ENST00000482714 PPP2R5BQ15173 497 aa17.97■□□□□ 0.47
CCM2-215ENST00000482714 OTUD7BQ6GQQ9 843 aa17.97■□□□□ 0.47
CCM2-215ENST00000482714 PAXIP1Q6ZW49 1069 aaPredicted RBP17.97■□□□□ 0.47
CCM2-215ENST00000482714 CCDC84Q86UT8 332 aaPredicted RBP17.97■□□□□ 0.47
CCM2-215ENST00000482714 GMCL1Q96IK5 515 aa17.97■□□□□ 0.47
CCM2-215ENST00000482714 LY9Q9HBG7 655 aa17.97■□□□□ 0.47
CCM2-215ENST00000482714 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.97■□□□□ 0.47
CCM2-215ENST00000482714 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.97■□□□□ 0.47
CCM2-215ENST00000482714 ATAD5Q96QE3 1844 aa17.97■□□□□ 0.47
CCM2-215ENST00000482714 OTOFQ9HC10 1997 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 CCDC69A6NI79 296 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 CALM1P0DP23 149 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 CALM2P0DP24 149 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 CALM3P0DP25 149 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 HOXA7P31268 230 aaPredicted RBP17.96■□□□□ 0.47
CCM2-215ENST00000482714 NEK4P51957 841 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 SYNE3Q6ZMZ3 975 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 Q6ZUG5 572 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 CATIPQ7Z7H3 387 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 PNMA1Q8ND90 353 aa17.96■□□□□ 0.47
CCM2-215ENST00000482714 CCL15-CCL14A0A0B4J2E2 113 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 WDR46O15213 610 aaKnown RBP17.95■□□□□ 0.46
CCM2-215ENST00000482714 HMGCS2P54868 508 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 CCL15Q16663 113 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 SLFN13Q68D06 897 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 DCAF4Q8WV16 495 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
CCM2-215ENST00000482714 PLA2G6O60733 806 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 SNHG28P0DPA3 235 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 VEGFBP49765 207 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 KIF23Q02241 960 aaPredicted RBP17.95■□□□□ 0.46
CCM2-215ENST00000482714 MOGSQ13724 837 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 GPATCH4Q5T3I0 446 aaKnown RBP17.95■□□□□ 0.46
CCM2-215ENST00000482714 NFXL1Q6ZNB6 911 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 ANKRD23Q86SG2 305 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 CLEC10AQ8IUN9 316 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 JMYQ8N9B5 988 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 AGTPBP1Q9UPW5 1226 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 SLC12A7Q9Y666 1083 aa17.95■□□□□ 0.46
CCM2-215ENST00000482714 USP17L15C9J2P7 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 USP17L13C9JLJ4 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 USP17L11C9JVI0 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 USP17L18D6R9N7 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 USP17L22D6RA61 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 USP17L17D6RBQ6 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 USP17L19D6RCP7 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 USP17L20D6RJB6 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 DDAH1O94760 285 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 NDUFB10O96000 172 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 ALDH1A1P00352 501 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 CPA1P15085 419 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 SLC1A4P43007 532 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 USP17L24Q0WX57 530 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 TROAPQ12815 778 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 COL9A3Q14050 684 aaPredicted RBP17.94■□□□□ 0.46
CCM2-215ENST00000482714 LRRC47Q8N1G4 583 aaKnown RBP17.94■□□□□ 0.46
CCM2-215ENST00000482714 BRI3BPQ8WY22 251 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 ZNF274Q96GC6 653 aaPredicted RBP17.94■□□□□ 0.46
CCM2-215ENST00000482714 PHIPQ8WWQ0 1821 aa17.94■□□□□ 0.46
CCM2-215ENST00000482714 ST18O60284 1047 aa17.93■□□□□ 0.46
CCM2-215ENST00000482714 BMP3P12645 472 aa17.93■□□□□ 0.46
CCM2-215ENST00000482714 MCM2P49736 904 aa17.93■□□□□ 0.46
CCM2-215ENST00000482714 CHURC1Q8WUH1 139 aa17.93■□□□□ 0.46
CCM2-215ENST00000482714 BRF1Q92994 677 aa17.93■□□□□ 0.46
CCM2-215ENST00000482714 CHMP4CQ96CF2 233 aa17.93■□□□□ 0.46
CCM2-215ENST00000482714 LRRC2Q9BYS8 371 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms