RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 USP17L10C9JJH3 530 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 RPS6KB1P23443 525 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 ANAPC15P60006 121 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 NFXL1Q6ZNB6 911 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 Q6ZUG5 572 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 DHX32Q7L7V1 743 aaKnown RBP15.54■□□□□ 0.08
HDAC1-208ENST00000482310 CCDC102AQ96A19 550 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 HHIPL1Q96JK4 782 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 TMEM47Q9BQJ4 181 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 LARP6Q9BRS8 491 aaKnown RBP15.54■□□□□ 0.08
HDAC1-208ENST00000482310 WDR18Q9BV38 432 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 CYP46A1Q9Y6A2 500 aa15.54■□□□□ 0.08
HDAC1-208ENST00000482310 BAZ2BQ9UIF8 2168 aaKnown RBP15.53■□□□□ 0.08
HDAC1-208ENST00000482310 CCL15-CCL14A0A0B4J2E2 113 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 SH2B2O14492 632 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-208ENST00000482310 HMGB1P09429 215 aaKnown RBP15.53■□□□□ 0.08
HDAC1-208ENST00000482310 ZBTB48P10074 688 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-208ENST00000482310 RBM25P49756 843 aaKnown RBP15.53■□□□□ 0.08
HDAC1-208ENST00000482310 BACE1P56817 501 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 SNAPC2Q13487 334 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 CCL15Q16663 113 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 KIAA1755Q5JYT7 1200 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 RCSD1Q6JBY9 416 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 RUFY3Q7L099 469 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 NUP88Q99567 741 aaPredicted RBP15.53■□□□□ 0.08
HDAC1-208ENST00000482310 MYL10Q9BUA6 226 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 SH2D4AQ9H788 454 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 KAT14Q9H8E8 782 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 GOPCQ9HD26 462 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 TCP11L1Q9NUJ3 509 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 TMOD4Q9NZQ9 345 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 NYAP2Q9P242 653 aa15.53■□□□□ 0.08
HDAC1-208ENST00000482310 TOP1P11387 765 aaKnown RBP15.52■□□□□ 0.08
HDAC1-208ENST00000482310 GTF2A2P52657 109 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 EXOSC10Q01780 885 aaKnown RBP15.52■□□□□ 0.08
HDAC1-208ENST00000482310 KIF23Q02241 960 aaPredicted RBP15.52■□□□□ 0.08
HDAC1-208ENST00000482310 SEC23AQ15436 765 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 USP17L2Q6R6M4 530 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 IGDCC4Q8TDY8 1250 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 KIF2CQ99661 725 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 TBC1D2Q9BYX2 928 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 LY9Q9HBG7 655 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 ZSWIM6Q9HCJ5 1215 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 PDRG1Q9NUG6 133 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 KCNH4Q9UQ05 1017 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 TMX2Q9Y320 296 aa15.52■□□□□ 0.08
HDAC1-208ENST00000482310 RLFQ13129 1914 aa15.52■□□□□ 0.07
HDAC1-208ENST00000482310 FRMPD2Q68DX3 1309 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-208ENST00000482310 A0A0G2JLL6 359 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-208ENST00000482310 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 RXRAP19793 462 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 NEK4P51957 841 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 APOBRQ0VD83 1088 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 CCDC96Q2M329 555 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 CCDC178Q5BJE1 867 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 TREML2Q5T2D2 321 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 PRRT2Q7Z6L0 340 aaPredicted RBP15.51■□□□□ 0.07
HDAC1-208ENST00000482310 CCDC144CPQ8IYA2 1237 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 PNMA1Q8ND90 353 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 NUP133Q8WUM0 1156 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 BRI3BPQ8WY22 251 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 BRF1Q92994 677 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 MS4A4AQ96JQ5 239 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 TMEM87BQ96K49 555 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 KIAA1683Q9H0B3 1180 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 VCPKMTQ9H867 229 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 EMILIN3Q9NT22 766 aa15.51■□□□□ 0.07
HDAC1-208ENST00000482310 F5H6K3 240 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 CXCL11O14625 94 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 NDUFB10O96000 172 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 CETPP11597 493 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 VCAM1P19320 739 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 USP14P54578 494 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 KLRC3Q07444 240 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 NOGQ13253 232 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 PPP4R3BQ5MIZ7 849 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 FAM83BQ5T0W9 1011 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 SLFN13Q68D06 897 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 DGKHQ86XP1 1220 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 TM6SF1Q9BZW5 370 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 TANGO6Q9C0B7 1094 aa15.5■□□□□ 0.07
HDAC1-208ENST00000482310 RPAP3Q9H6T3 665 aaPredicted RBP15.5■□□□□ 0.07
HDAC1-208ENST00000482310 WDR19Q8NEZ3 1342 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 KLF18A0A0U1RQI7 1052 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 MANSC4A6NHS7 340 aaPredicted RBP15.49■□□□□ 0.07
HDAC1-208ENST00000482310 C19orf81C9J6K1 198 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 NT5C2P49902 561 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 KCTD1Q719H9 257 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 MICU3Q86XE3 530 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 ZNF654Q8IZM8 581 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 TTC14Q96N46 770 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 GPCPD1Q9NPB8 672 aa15.49■□□□□ 0.07
HDAC1-208ENST00000482310 SMCHD1A6NHR9 2005 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 BTBD19C9JJ37 291 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 GOLGA8HP0CJ92 632 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 AK2P54819 239 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 SREBF2Q12772 1141 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 IKQ13123 557 aaPredicted RBP15.48■□□□□ 0.07
HDAC1-208ENST00000482310 MOGSQ13724 837 aa15.48■□□□□ 0.07
HDAC1-208ENST00000482310 TOB2Q14106 344 aaPredicted RBP15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms