RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 SCN4AP35499 1836 aa11.48□□□□□ -0.57
LIMK2-209ENST00000482270 MYH3P11055 1940 aa11.47□□□□□ -0.57
LIMK2-209ENST00000482270 SNED1Q8TER0 1413 aa11.47□□□□□ -0.57
LIMK2-209ENST00000482270 ZNF541Q9H0D2 1346 aa11.47□□□□□ -0.57
LIMK2-209ENST00000482270 HOXB7P09629 217 aa11.47□□□□□ -0.57
LIMK2-209ENST00000482270 ALDH1B1P30837 517 aa11.47□□□□□ -0.57
LIMK2-209ENST00000482270 FKBP4Q02790 459 aaKnown RBP eCLIP11.47□□□□□ -0.57
LIMK2-209ENST00000482270 CALD1Q05682 793 aaKnown RBP11.47□□□□□ -0.57
LIMK2-209ENST00000482270 TCIRG1Q13488 830 aa11.47□□□□□ -0.57
LIMK2-209ENST00000482270 TRIP4Q15650 581 aaPredicted RBP11.47□□□□□ -0.57
LIMK2-209ENST00000482270 RBM17Q96I25 401 aaKnown RBP11.47□□□□□ -0.57
LIMK2-209ENST00000482270 PHAXQ9H814 394 aaKnown RBP11.47□□□□□ -0.57
LIMK2-209ENST00000482270 CEP350Q5VT06 3117 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 LRRC37AA6NMS7 1700 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 RNF225M0QZC1 329 aaPredicted RBP11.46□□□□□ -0.57
LIMK2-209ENST00000482270 DDNO94850 711 aaPredicted RBP11.46□□□□□ -0.57
LIMK2-209ENST00000482270 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
LIMK2-209ENST00000482270 SERPINB4P48594 390 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 HTRA3P83110 453 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 AAMPQ13685 434 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 HSP90AB3PQ58FF7 597 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 TSPYL6Q8N831 410 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 PLBD2Q8NHP8 589 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 DNAJB12Q9NXW2 375 aaKnown RBP11.46□□□□□ -0.57
LIMK2-209ENST00000482270 TRMT112Q9UI30 125 aaKnown RBP11.46□□□□□ -0.57
LIMK2-209ENST00000482270 MTMR7Q9Y216 660 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 KCNMB2Q9Y691 235 aa11.46□□□□□ -0.57
LIMK2-209ENST00000482270 CACNA1FO60840 1977 aa11.46□□□□□ -0.58
LIMK2-209ENST00000482270 ABCC4O15439 1325 aa11.45□□□□□ -0.58
LIMK2-209ENST00000482270 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
LIMK2-209ENST00000482270 VEGFAP15692 232 aaPredicted RBP11.45□□□□□ -0.58
LIMK2-209ENST00000482270 B4GALNT3Q6L9W6 998 aa11.45□□□□□ -0.58
LIMK2-209ENST00000482270 RTKN2Q8IZC4 609 aa11.45□□□□□ -0.58
LIMK2-209ENST00000482270 TNFRSF25Q93038 417 aa11.45□□□□□ -0.58
LIMK2-209ENST00000482270 HYPKQ9NX55 129 aa11.45□□□□□ -0.58
LIMK2-209ENST00000482270 LTBP1Q14766 1721 aa11.44□□□□□ -0.58
LIMK2-209ENST00000482270 IARSP41252 1262 aaKnown RBP11.44□□□□□ -0.58
LIMK2-209ENST00000482270 DNM1Q05193 864 aaKnown RBP11.44□□□□□ -0.58
LIMK2-209ENST00000482270 SLC10A5Q5PT55 438 aa11.44□□□□□ -0.58
LIMK2-209ENST00000482270 C8orf86Q6ZUL3 223 aa11.44□□□□□ -0.58
LIMK2-209ENST00000482270 BEND7Q8N7W2 519 aaPredicted RBP11.44□□□□□ -0.58
LIMK2-209ENST00000482270 PIK3R5Q8WYR1 880 aa11.44□□□□□ -0.58
LIMK2-209ENST00000482270 FAM89AQ96GI7 184 aa11.44□□□□□ -0.58
LIMK2-209ENST00000482270 CRAMP1Q96RY5 1269 aa11.44□□□□□ -0.58
LIMK2-209ENST00000482270 MKL2Q9ULH7 1088 aa11.44□□□□□ -0.58
LIMK2-209ENST00000482270 SLC6A14Q9UN76 642 aa11.44□□□□□ -0.58
LIMK2-209ENST00000482270 ALBP02768 609 aa11.43□□□□□ -0.58
LIMK2-209ENST00000482270 HFE2Q6ZVN8 426 aa11.43□□□□□ -0.58
LIMK2-209ENST00000482270 DHX32Q7L7V1 743 aaKnown RBP11.43□□□□□ -0.58
LIMK2-209ENST00000482270 SMC1BQ8NDV3 1235 aa11.43□□□□□ -0.58
LIMK2-209ENST00000482270 EDEM1Q92611 657 aa11.43□□□□□ -0.58
LIMK2-209ENST00000482270 JARID2Q92833 1246 aaPredicted RBP11.43□□□□□ -0.58
LIMK2-209ENST00000482270 MYD88Q99836 296 aa11.43□□□□□ -0.58
LIMK2-209ENST00000482270 ISCA1Q9BUE6 129 aa11.43□□□□□ -0.58
LIMK2-209ENST00000482270 DUOX1Q9NRD9 1551 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 RNF123Q5XPI4 1314 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 ZBED9Q6R2W3 1325 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 ADARB2-AS1A8MUL3 147 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 PHF20L1A8MW92 1017 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 M0R082 166 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 CPB1P15086 417 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 EIF1AXP47813 144 aaKnown RBP11.42□□□□□ -0.58
LIMK2-209ENST00000482270 DGKGP49619 791 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 FSTL1Q12841 308 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 ZNF417Q8TAU3 575 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 NUDT8Q8WV74 236 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 ZNF587Q96SQ5 575 aaPredicted RBP11.42□□□□□ -0.58
LIMK2-209ENST00000482270 FAM13BQ9NYF5 915 aa11.42□□□□□ -0.58
LIMK2-209ENST00000482270 ADAMTSL1Q8N6G6 1762 aa11.41□□□□□ -0.58
LIMK2-209ENST00000482270 HOXB4P17483 251 aaPredicted RBP11.41□□□□□ -0.58
LIMK2-209ENST00000482270 CCDC27Q2M243 656 aa11.41□□□□□ -0.58
LIMK2-209ENST00000482270 NOM1Q5C9Z4 860 aaKnown RBP11.41□□□□□ -0.58
LIMK2-209ENST00000482270 CCDC30Q5VVM6 783 aa11.41□□□□□ -0.58
LIMK2-209ENST00000482270 DDX46Q7L014 1031 aaKnown RBP11.41□□□□□ -0.58
LIMK2-209ENST00000482270 NSUN5Q96P11 429 aaKnown RBP11.41□□□□□ -0.58
LIMK2-209ENST00000482270 PSMD1Q99460 953 aa11.41□□□□□ -0.58
LIMK2-209ENST00000482270 SUV39H2Q9H5I1 410 aa11.41□□□□□ -0.58
LIMK2-209ENST00000482270 NAGPAQ9UK23 515 aa11.41□□□□□ -0.58
LIMK2-209ENST00000482270 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
LIMK2-209ENST00000482270 FANCIQ9NVI1 1328 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 A6NHS1 94 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 H3BRB1 525 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 GRAPQ13588 217 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 AOC3Q16853 763 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 TWISTNBQ3B726 338 aaPredicted RBP11.4□□□□□ -0.58
LIMK2-209ENST00000482270 FAM35AQ86V20 835 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 GRAPLQ8TC17 118 aaPredicted RBP11.4□□□□□ -0.58
LIMK2-209ENST00000482270 MDFIQ99750 246 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 TUT1Q9H6E5 874 aaKnown RBP11.4□□□□□ -0.58
LIMK2-209ENST00000482270 MAP3K2Q9Y2U5 619 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 STARD13Q9Y3M8 1113 aa11.4□□□□□ -0.58
LIMK2-209ENST00000482270 FZD9O00144 591 aa11.39□□□□□ -0.59
LIMK2-209ENST00000482270 IRS4O14654 1257 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-209ENST00000482270 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
LIMK2-209ENST00000482270 MMP20O60882 483 aa11.39□□□□□ -0.59
LIMK2-209ENST00000482270 C8orf34Q49A92 452 aa11.39□□□□□ -0.59
LIMK2-209ENST00000482270 EAPPQ56P03 285 aaPredicted RBP11.39□□□□□ -0.59
LIMK2-209ENST00000482270 G2E3Q7L622 706 aa11.39□□□□□ -0.59
LIMK2-209ENST00000482270 JDP2Q8WYK2 163 aa11.39□□□□□ -0.59
LIMK2-209ENST00000482270 CELF1Q92879 486 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms