RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 DEFB118Q96PH6 123 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 CRBNQ96SW2 442 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 KANSL2Q9H9L4 492 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 STAP2Q9UGK3 403 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 MYH7P12883 1935 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 RLFQ13129 1914 aa11.68□□□□□ -0.54
TMEM39A-207ENST00000482162 BAZ2AQ9UIF9 1905 aaKnown RBP11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 SLC15A5A6NIM6 579 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 CYP2B6P20813 491 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 CCNA1P78396 465 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 TRIM32Q13049 653 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 TICAM2Q86XR7 235 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 GCC1Q96CN9 775 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 DDRGK1Q96HY6 314 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 PAGR1Q9BTK6 254 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 EPB41L4AQ9HCS5 686 aaPredicted RBP11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 ARPP21Q9UBL0 812 aaPredicted RBP11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 ROBO3Q96MS0 1386 aa11.67□□□□□ -0.54
TMEM39A-207ENST00000482162 IGKV6D-41A0A0C4DH26 115 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 PATL2C9JE40 543 aaKnown RBP11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 H0YGN5 161 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 MPHOSPH10O00566 681 aaKnown RBP11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 ERC2O15083 957 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 GPAA1O43292 621 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 FARP2O94887 1054 aaPredicted RBP11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 EEF2P13639 858 aaKnown RBP11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 GNAT2P19087 354 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 RASA1P20936 1047 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 PTPREP23469 700 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 DSG3P32926 999 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 MAP2K5Q13163 448 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 GRB14Q14449 540 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 ZMYM1Q5SVZ6 1142 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 CLEC10AQ8IUN9 316 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 AMOTL1Q8IY63 956 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 MB21D1Q8N884 522 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 SHCBP1Q8NEM2 672 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 ARHGEF10LQ9HCE6 1279 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 HMX1Q9NP08 348 aaPredicted RBP11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 OGDHLQ9ULD0 1010 aa11.66□□□□□ -0.54
TMEM39A-207ENST00000482162 M0R2C6 588 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 FOXP2O15409 715 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 TFRCP02786 760 aaKnown RBP11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 MX1P20591 662 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 RGS2P41220 211 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 ICA1Q05084 483 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 CCL14Q16627 93 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 LRRFIP1Q32MZ4 808 aaKnown RBP11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 LHX8Q68G74 356 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 SMC5Q8IY18 1101 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 MKL1Q969V6 931 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 APBA2Q99767 749 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 MOV10L1Q9BXT6 1211 aaKnown RBP11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 PRO3102Q9H379 93 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 SH2D4AQ9H788 454 aa11.65□□□□□ -0.54
TMEM39A-207ENST00000482162 WDR46O15213 610 aaKnown RBP11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 STRNO43815 780 aa11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 PRKAR2AP13861 404 aaKnown RBP11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 CACNB2Q08289 660 aaPredicted RBP11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 HABP4Q5JVS0 413 aaKnown RBP11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 IFNL3Q8IZI9 196 aa11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 ABRAQ8N0Z2 381 aa11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 SEC62Q99442 399 aaKnown RBP11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 HTATIP2Q9BUP3 242 aa11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 SPATC1LQ9H0A9 340 aa11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 NYAP2Q9P242 653 aa11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 SYNPO2Q9UMS6 1093 aa11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 GREB1LQ9C091 1923 aaPredicted RBP11.64□□□□□ -0.55
TMEM39A-207ENST00000482162 ZKSCAN1P17029 563 aaPredicted RBP11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 PDE1AP54750 535 aa11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 ANKRD45Q5TZF3 282 aa11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 CCAR1Q8IX12 1150 aaKnown RBP11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 SPICE1Q8N0Z3 855 aa11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 REPS2Q8NFH8 660 aa11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 PAWRQ96IZ0 340 aaKnown RBP11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 MROH8Q9H579 483 aa11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 FLRT1Q9NZU1 646 aa11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 TRIOBPQ9H2D6 2365 aa11.63□□□□□ -0.55
TMEM39A-207ENST00000482162 MINDY4BA8MYZ0 360 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 FLOT1O75955 427 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 COL6A1P12109 1028 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 ERCC3P19447 782 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 ALX1Q15699 326 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 NECAB2Q7Z6G3 386 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 NPLOC4Q8TAT6 608 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 DPF3Q92784 378 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 ATG4CQ96DT6 458 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 TANGO6Q9C0B7 1094 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 FBXO28Q9NVF7 368 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 A0A0G2JMZ2 1700 aa11.62□□□□□ -0.55
TMEM39A-207ENST00000482162 F5H6K3 240 aa11.61□□□□□ -0.55
TMEM39A-207ENST00000482162 VWA5AO00534 786 aa11.61□□□□□ -0.55
TMEM39A-207ENST00000482162 COBLO75128 1261 aa11.61□□□□□ -0.55
TMEM39A-207ENST00000482162 FGRP09769 529 aa11.61□□□□□ -0.55
TMEM39A-207ENST00000482162 CCND3P30281 292 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms