RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.9□□□□□ -0.186e-7■■■■■ 42.5
SNRNP25-206ENST00000481947 SMARCC2Q8TAQ2 1214 aa13.9□□□□□ -0.18
SNRNP25-206ENST00000481947 SYNPO2Q9UMS6 1093 aa13.9□□□□□ -0.18
SNRNP25-206ENST00000481947 A0A1W2PRG0 241 aa13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 DHX16O60231 1041 aaKnown RBP13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 DTNBO60941 627 aa13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 SNHG28P0DPA3 235 aa13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 NF2P35240 595 aa13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 ATP2B2Q01814 1243 aa13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 MAP3K11Q16584 847 aa13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 ZKSCAN4Q969J2 545 aaPredicted RBP13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 ARHGEF10LQ9HCE6 1279 aa13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 RBM28Q9NW13 759 aaKnown RBP13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 SMC3Q9UQE7 1217 aa13.89□□□□□ -0.19
SNRNP25-206ENST00000481947 CCDC196A0A1B0GTZ2 297 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 PTPDC1A2A3K4 754 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 PALM3A6NDB9 673 aaPredicted RBP13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 TRAF5O00463 557 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 PPP1R12BO60237 982 aaPredicted RBP13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 JAK2O60674 1132 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 IFNAR1P17181 557 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 GJB2P29033 226 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 FUT2Q10981 343 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 PRKG1Q13976 671 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 RASGRP2Q7LDG7 609 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 CCDC84Q86UT8 332 aaPredicted RBP13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 GMCL1P1Q8NEA9 526 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 CTCFLQ8NI51 663 aaPredicted RBP13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 ACER1Q8TDN7 264 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 CWC22Q9HCG8 908 aaKnown RBP13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 MAD2L2Q9UI95 211 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 TMX2Q9Y320 296 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 TRPM7Q96QT4 1865 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 MYH6P13533 1939 aa13.88□□□□□ -0.19
SNRNP25-206ENST00000481947 USP17L5A8MUK1 530 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 CPLX1O14810 134 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 CDKL5O76039 1030 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 PLEKHA8P1O95397 391 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 PDHBP11177 359 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 PTPRAP18433 802 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 KIF5BP33176 963 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 ECE1P42892 770 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 IREB2P48200 963 aaKnown RBP13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 MAP3K9P80192 1104 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 FMR1Q06787 632 aaKnown RBP eCLIP13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 CHADLQ6NUI6 762 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 TMTC3Q6ZXV5 915 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 NBPF11Q86T75 865 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 STAG2Q8N3U4 1231 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 SNCAIPQ9Y6H5 919 aa13.87□□□□□ -0.19
SNRNP25-206ENST00000481947 F5H6K3 240 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 ITGBL1O95965 494 aaPredicted RBP13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 HMGN5P82970 282 aaKnown RBP13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 KLRC3Q07444 240 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 VGLL4Q14135 290 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 ASPRV1Q53RT3 343 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 CPLX2Q6PUV4 134 aaKnown RBP13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 USP17L2Q6R6M4 530 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 SRBD1Q8N5C6 995 aaKnown RBP13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 DCAF4Q8WV16 495 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 WDR18Q9BV38 432 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 PICK1Q9NRD5 415 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 MTMR7Q9Y216 660 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 CNTNAP5Q8WYK1 1306 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 STK36Q9NRP7 1315 aa13.86□□□□□ -0.19
SNRNP25-206ENST00000481947 FMNL1O95466 1100 aaPredicted RBP13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 NDUFB10O96000 172 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 PARP1P09874 1014 aaKnown RBP13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 GNAQP50148 359 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 ZNF543Q08ER8 600 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 SLC35G1Q2M3R5 365 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 KIAA1755Q5JYT7 1200 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 SLFN13Q68D06 897 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 MOB2Q70IA6 237 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 CMTR1Q8N1G2 835 aaKnown RBP13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 PHKBQ93100 1093 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 GMCL1Q96IK5 515 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 KIAA1683Q9H0B3 1180 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 SH2D4AQ9H788 454 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 VCPKMTQ9H867 229 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 PTPRFP10586 1907 aa13.85□□□□□ -0.19
SNRNP25-206ENST00000481947 KLRF2D3W0D1 207 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 KIF3CO14782 793 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 PPFIA3O75145 1194 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 GOLGA8HP0CJ92 632 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 SSRP1Q08945 709 aaKnown RBP13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 LDLRAD1Q5T700 205 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 ARMC9Q7Z3E5 817 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 ANKRD13AQ8IZ07 590 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 LZTS2Q9BRK4 669 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 SPZ1Q9BXG8 430 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 SLC26A6Q9BXS9 759 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 RNF26Q9BY78 433 aaPredicted RBP13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 AS3MTQ9HBK9 375 aa13.84□□□□□ -0.19
SNRNP25-206ENST00000481947 GOPCQ9HD26 462 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms