RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 GADL1Q6ZQY3 521 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 ZNF384Q8TF68 577 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 SNRKQ9NRH2 765 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 PKD2L1Q9P0L9 805 aa11.07□□□□□ -0.64
HLA-B-253ENST00000481849 BDP1A6H8Y1 2624 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 RFX7Q2KHR2 1363 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 GPR75-ASB3A0A0A6YYF3 556 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 CXCL11O14625 94 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 CD46P15529 392 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 PTPRAP18433 802 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 MDM2Q00987 491 aaPredicted RBP11.06□□□□□ -0.64
HLA-B-253ENST00000481849 GPAT2Q6NUI2 795 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 PARK7Q99497 189 aaKnown RBP11.06□□□□□ -0.64
HLA-B-253ENST00000481849 LRP2BPQ9P2M1 347 aa11.06□□□□□ -0.64
HLA-B-253ENST00000481849 TRIM75PA6NK02 468 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 KDM4AO75164 1064 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 LDHCP07864 332 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 MCAMP43121 646 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 RHBDL3P58872 404 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 GSTO1P78417 241 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 TTC39AQ5SRH9 613 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 DEFB123Q8N688 67 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 NSUN4Q96CB9 384 aaKnown RBP11.05□□□□□ -0.64
HLA-B-253ENST00000481849 ADGRA2Q96PE1 1338 aa11.05□□□□□ -0.64
HLA-B-253ENST00000481849 LAMB1P07942 1786 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 A0A0G2JLL6 359 aaPredicted RBP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 SURF6O75683 361 aaKnown RBP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 GNRH1P01148 92 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 UQCRFS1P1P0C7P4 283 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 ARID4AP29374 1257 aaPredicted RBP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 MTFR1Q15390 333 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 FASTKD5Q7L8L6 764 aaKnown RBP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 PRRT2Q7Z6L0 340 aaPredicted RBP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 ITPRIPQ8IWB1 547 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 FTSJ3Q8IY81 847 aaKnown RBP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 TEX11Q8IYF3 940 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 RAET1EQ8TD07 263 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 SH3RF3Q8TEJ3 882 aaPredicted RBP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 DBNDD2Q9BQY9 259 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 NOL10Q9BSC4 688 aaKnown RBP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.04□□□□□ -0.64
HLA-B-253ENST00000481849 SRRDQ9UH36 339 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 AFG3L2Q9Y4W6 797 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 MYPNQ86TC9 1320 aa11.04□□□□□ -0.64
HLA-B-253ENST00000481849 CTNND1O60716 968 aaKnown RBP11.03□□□□□ -0.64
HLA-B-253ENST00000481849 BCRP11274 1271 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 HOXD10P28358 340 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 PRMT2P55345 433 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 FCGRTP55899 365 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 MAP3K10Q02779 954 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 PRKCZQ05513 592 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 TNNI3KQ59H18 835 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 CCDC158Q5M9N0 1113 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 NAA16Q6N069 864 aaPredicted RBP11.03□□□□□ -0.64
HLA-B-253ENST00000481849 CYP4X1Q8N118 509 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 OSBPL5Q9H0X9 879 aaPredicted RBP11.03□□□□□ -0.64
HLA-B-253ENST00000481849 AATFQ9NY61 560 aaKnown RBP eCLIP11.03□□□□□ -0.64
HLA-B-253ENST00000481849 BIN2Q9UBW5 565 aaPredicted RBP11.03□□□□□ -0.64
HLA-B-253ENST00000481849 FPGT-TNNI3KV9GXZ4 949 aa11.03□□□□□ -0.64
HLA-B-253ENST00000481849 RLBP1P12271 317 aa11.02□□□□□ -0.65
HLA-B-253ENST00000481849 GRK4P32298 578 aa11.02□□□□□ -0.65
HLA-B-253ENST00000481849 ATP8B2P98198 1209 aa11.02□□□□□ -0.65
HLA-B-253ENST00000481849 RRP1BQ14684 758 aaKnown RBP11.02□□□□□ -0.65
HLA-B-253ENST00000481849 TREML2Q5T2D2 321 aa11.02□□□□□ -0.65
HLA-B-253ENST00000481849 Q7L0L9 218 aa11.02□□□□□ -0.65
HLA-B-253ENST00000481849 SSH3Q8TE77 659 aa11.02□□□□□ -0.65
HLA-B-253ENST00000481849 SMCR8Q8TEV9 937 aaPredicted RBP11.02□□□□□ -0.65
HLA-B-253ENST00000481849 CCDC8Q9H0W5 538 aaPredicted RBP11.02□□□□□ -0.65
HLA-B-253ENST00000481849 TLR7Q9NYK1 1049 aaKnown RBP11.02□□□□□ -0.65
HLA-B-253ENST00000481849 GABRQQ9UN88 632 aa11.02□□□□□ -0.65
HLA-B-253ENST00000481849 ZSWIM8A7E2V4 1837 aa11.02□□□□□ -0.65
HLA-B-253ENST00000481849 CYP2E1P05181 493 aaPredicted RBP11.01□□□□□ -0.65
HLA-B-253ENST00000481849 ZAP70P43403 619 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 SPP2Q13103 211 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 ADGRA1Q86SQ6 560 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 ALYREFQ86V81 257 aaKnown RBP11.01□□□□□ -0.65
HLA-B-253ENST00000481849 MAPKAPK5Q8IW41 473 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 ANKRD13CQ8N6S4 541 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 KRI1Q8N9T8 703 aaKnown RBP11.01□□□□□ -0.65
HLA-B-253ENST00000481849 P2RX7Q99572 595 aaKnown RBP11.01□□□□□ -0.65
HLA-B-253ENST00000481849 PIH1D3Q9NQM4 214 aaKnown RBP11.01□□□□□ -0.65
HLA-B-253ENST00000481849 IGSF5Q9NSI5 407 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 MTMR10Q9NXD2 777 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 AGTPBP1Q9UPW5 1226 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 MYH13Q9UKX3 1938 aa11.01□□□□□ -0.65
HLA-B-253ENST00000481849 TNPO2O14787 897 aaKnown RBP11□□□□□ -0.65
HLA-B-253ENST00000481849 ZBTB7BO15156 539 aaPredicted RBP11□□□□□ -0.65
HLA-B-253ENST00000481849 BAG3O95817 575 aa11□□□□□ -0.65
HLA-B-253ENST00000481849 CCL5P13501 91 aa11□□□□□ -0.65
HLA-B-253ENST00000481849 ELNP15502 786 aa11□□□□□ -0.65
HLA-B-253ENST00000481849 HMGCS2P54868 508 aa11□□□□□ -0.65
HLA-B-253ENST00000481849 USP46P62068 366 aa11□□□□□ -0.65
HLA-B-253ENST00000481849 DIEXFQ68CQ4 756 aaKnown RBP11□□□□□ -0.65
HLA-B-253ENST00000481849 ZNF280CQ8ND82 737 aa11□□□□□ -0.65
HLA-B-253ENST00000481849 TGFBRAP1Q8WUH2 860 aa11□□□□□ -0.65
HLA-B-253ENST00000481849 USB1Q9BQ65 265 aaKnown RBP11□□□□□ -0.65
HLA-B-253ENST00000481849 RNF208Q9H0X6 261 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms