RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 CNKSR2Q8WXI2 1034 aa27.03■■□□□ 1.92
SHISA4-203ENST00000481699 MKL1Q969V6 931 aa27.03■■□□□ 1.92
SHISA4-203ENST00000481699 WNK4Q96J92 1243 aa27.03■■□□□ 1.92
SHISA4-203ENST00000481699 SYNPO2Q9UMS6 1093 aa27.03■■□□□ 1.92
SHISA4-203ENST00000481699 TMX2Q9Y320 296 aa27.03■■□□□ 1.92
SHISA4-203ENST00000481699 SLC12A7Q9Y666 1083 aa27.03■■□□□ 1.92
SHISA4-203ENST00000481699 GREB1LQ9C091 1923 aaPredicted RBP27.02■■□□□ 1.92
SHISA4-203ENST00000481699 ECE1P42892 770 aa27.02■■□□□ 1.92
SHISA4-203ENST00000481699 NOVP48745 357 aa27.02■■□□□ 1.92
SHISA4-203ENST00000481699 MTMR2Q13614 643 aa27.02■■□□□ 1.92
SHISA4-203ENST00000481699 PNMA1Q8ND90 353 aa27.02■■□□□ 1.92
SHISA4-203ENST00000481699 HHIPL1Q96JK4 782 aa27.02■■□□□ 1.92
SHISA4-203ENST00000481699 ALDH8A1Q9H2A2 487 aaPredicted RBP27.02■■□□□ 1.92
SHISA4-203ENST00000481699 TMOD4Q9NZQ9 345 aa27.02■■□□□ 1.92
SHISA4-203ENST00000481699 MTMR7Q9Y216 660 aa27.02■■□□□ 1.92
SHISA4-203ENST00000481699 AFG3L2Q9Y4W6 797 aa27.02■■□□□ 1.92
SHISA4-203ENST00000481699 C19orf81C9J6K1 198 aa27.01■■□□□ 1.91
SHISA4-203ENST00000481699 AK2P54819 239 aa27.01■■□□□ 1.91
SHISA4-203ENST00000481699 SIAH1Q8IUQ4 282 aa27.01■■□□□ 1.91
SHISA4-203ENST00000481699 FBXL16Q8N461 479 aa27.01■■□□□ 1.91
SHISA4-203ENST00000481699 CCDC102AQ96A19 550 aa27.01■■□□□ 1.91
SHISA4-203ENST00000481699 KIAA1683Q9H0B3 1180 aa27.01■■□□□ 1.91
SHISA4-203ENST00000481699 ISY1Q9ULR0 285 aaKnown RBP27.01■■□□□ 1.91
SHISA4-203ENST00000481699 KLF18A0A0U1RQI7 1052 aa27■■□□□ 1.91
SHISA4-203ENST00000481699 A0A1W2PRG0 241 aa27■■□□□ 1.91
SHISA4-203ENST00000481699 CXCL11O14625 94 aa27■■□□□ 1.91
SHISA4-203ENST00000481699 ZBTB48P10074 688 aaPredicted RBP27■■□□□ 1.91
SHISA4-203ENST00000481699 BACE1P56817 501 aa27■■□□□ 1.91
SHISA4-203ENST00000481699 APOBRQ0VD83 1088 aa27■■□□□ 1.91
SHISA4-203ENST00000481699 MKRN3Q13064 507 aaKnown RBP27■■□□□ 1.91
SHISA4-203ENST00000481699 SNAPC2Q13487 334 aa27■■□□□ 1.91
SHISA4-203ENST00000481699 USP17L2Q6R6M4 530 aa27■■□□□ 1.91
SHISA4-203ENST00000481699 NOL8Q76FK4 1167 aaKnown RBP27■■□□□ 1.91
SHISA4-203ENST00000481699 SGMS1Q86VZ5 419 aa27■■□□□ 1.91
SHISA4-203ENST00000481699 IRF6O14896 467 aa26.99■■□□□ 1.91
SHISA4-203ENST00000481699 TOB2Q14106 344 aaPredicted RBP26.99■■□□□ 1.91
SHISA4-203ENST00000481699 SPRYD7Q5W111 196 aa26.99■■□□□ 1.91
SHISA4-203ENST00000481699 RASAL3Q86YV0 1011 aa26.99■■□□□ 1.91
SHISA4-203ENST00000481699 ZNF654Q8IZM8 581 aa26.99■■□□□ 1.91
SHISA4-203ENST00000481699 AGXT2Q9BYV1 514 aa26.99■■□□□ 1.91
SHISA4-203ENST00000481699 VCPKMTQ9H867 229 aa26.99■■□□□ 1.91
SHISA4-203ENST00000481699 SENP2Q9HC62 589 aa26.99■■□□□ 1.91
SHISA4-203ENST00000481699 F5H6K3 240 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 CALM1P0DP23 149 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 CALM2P0DP24 149 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 CALM3P0DP25 149 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 KLRC3Q07444 240 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 GRM1Q13255 1194 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 SLFN13Q68D06 897 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 GMCL1P1Q8NEA9 526 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 NUP133Q8WUM0 1156 aa26.98■■□□□ 1.91
SHISA4-203ENST00000481699 GOLGA8BA8MQT2 603 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 ZBTB43O43298 467 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 DDAH1O94760 285 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 MCM2P49736 904 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 GTF2A2P52657 109 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 HMGCS2P54868 508 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 DEFB115Q30KQ5 88 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 LPAR1Q92633 364 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 KCNH4Q9UQ05 1017 aa26.97■■□□□ 1.91
SHISA4-203ENST00000481699 SLC10A3P09131 477 aa26.96■■□□□ 1.91
SHISA4-203ENST00000481699 GJA5P36382 358 aa26.96■■□□□ 1.91
SHISA4-203ENST00000481699 CCDC96Q2M329 555 aa26.96■■□□□ 1.91
SHISA4-203ENST00000481699 APOA5Q6Q788 366 aa26.96■■□□□ 1.91
SHISA4-203ENST00000481699 GADL1Q6ZQY3 521 aa26.96■■□□□ 1.91
SHISA4-203ENST00000481699 SPICE1Q8N0Z3 855 aa26.96■■□□□ 1.91
SHISA4-203ENST00000481699 CHMP4CQ96CF2 233 aa26.96■■□□□ 1.91
SHISA4-203ENST00000481699 LARP6Q9BRS8 491 aaKnown RBP26.96■■□□□ 1.91
SHISA4-203ENST00000481699 NDUFB10O96000 172 aa26.95■■□□□ 1.9
SHISA4-203ENST00000481699 CETPP11597 493 aa26.95■■□□□ 1.9
SHISA4-203ENST00000481699 SLC1A4P43007 532 aa26.95■■□□□ 1.9
SHISA4-203ENST00000481699 FASTKD5Q7L8L6 764 aaKnown RBP26.95■■□□□ 1.9
SHISA4-203ENST00000481699 MICU3Q86XE3 530 aa26.95■■□□□ 1.9
SHISA4-203ENST00000481699 CTCFLQ8NI51 663 aaPredicted RBP26.95■■□□□ 1.9
SHISA4-203ENST00000481699 DCAF4Q8WV16 495 aa26.95■■□□□ 1.9
SHISA4-203ENST00000481699 BRPF3Q9ULD4 1205 aa26.95■■□□□ 1.9
SHISA4-203ENST00000481699 LIMCH1Q9UPQ0 1083 aa26.95■■□□□ 1.9
SHISA4-203ENST00000481699 A0A0G2JLL6 359 aaPredicted RBP26.94■■□□□ 1.9
SHISA4-203ENST00000481699 RASSF10A6NK89 507 aa26.94■■□□□ 1.9
SHISA4-203ENST00000481699 SH3D19Q5HYK7 790 aa26.94■■□□□ 1.9
SHISA4-203ENST00000481699 PRRT2Q7Z6L0 340 aaPredicted RBP26.94■■□□□ 1.9
SHISA4-203ENST00000481699 MYL10Q9BUA6 226 aa26.94■■□□□ 1.9
SHISA4-203ENST00000481699 MYH4Q9Y623 1939 aa26.93■■□□□ 1.9
SHISA4-203ENST00000481699 GOLGA8AA7E2F4 631 aa26.93■■□□□ 1.9
SHISA4-203ENST00000481699 PARP1P09874 1014 aaKnown RBP26.93■■□□□ 1.9
SHISA4-203ENST00000481699 KIF5BP33176 963 aa26.93■■□□□ 1.9
SHISA4-203ENST00000481699 RAB11FIP4Q86YS3 637 aa26.93■■□□□ 1.9
SHISA4-203ENST00000481699 ZNF274Q96GC6 653 aaPredicted RBP26.93■■□□□ 1.9
SHISA4-203ENST00000481699 GMCL1Q96IK5 515 aa26.93■■□□□ 1.9
SHISA4-203ENST00000481699 EMILIN3Q9NT22 766 aa26.93■■□□□ 1.9
SHISA4-203ENST00000481699 MANSC4A6NHS7 340 aaPredicted RBP26.92■■□□□ 1.9
SHISA4-203ENST00000481699 WDR46O15213 610 aaKnown RBP26.92■■□□□ 1.9
SHISA4-203ENST00000481699 PDHBP11177 359 aa26.92■■□□□ 1.9
SHISA4-203ENST00000481699 BMP3P12645 472 aa26.92■■□□□ 1.9
SHISA4-203ENST00000481699 METAP2P50579 478 aaKnown RBP eCLIP26.92■■□□□ 1.9
SHISA4-203ENST00000481699 IKQ13123 557 aaPredicted RBP26.92■■□□□ 1.9
SHISA4-203ENST00000481699 CYP4F22Q6NT55 531 aa26.92■■□□□ 1.9
SHISA4-203ENST00000481699 CCDC144CPQ8IYA2 1237 aa26.92■■□□□ 1.9
SHISA4-203ENST00000481699 PROCA1Q8NCQ7 364 aaPredicted RBP26.92■■□□□ 1.9
SHISA4-203ENST00000481699 C12orf42Q96LP6 360 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms