RNA–Protein interactions for RNA: ENST00000481508.1

SSBP1-210, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-210ENST00000481508 C7P10643 843 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 BACE1P56817 501 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 TAF1CQ15572 869 aaPredicted RBP12.59□□□□□ -0.39
SSBP1-210ENST00000481508 SH3D19Q5HYK7 790 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 TMEM179Q6ZVK1 233 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 ANKRD23Q86SG2 305 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 SLC39A7Q92504 469 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 CFHR5Q9BXR6 569 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 AS3MTQ9HBK9 375 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 GINM1Q9NU53 330 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 ANAPC4Q9UJX5 808 aa12.59□□□□□ -0.39
SSBP1-210ENST00000481508 ALPK3Q96L96 1907 aa12.58□□□□□ -0.39
SSBP1-210ENST00000481508 IGKV6D-41A0A0C4DH26 115 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 FKTNO75072 461 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 CYP2C8P10632 490 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 FAM47AQ5JRC9 791 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 ESYT1Q9BSJ8 1104 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 DSCC1Q9BVC3 393 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 MKNK2Q9HBH9 465 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 CABP5Q9NP86 173 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 TRIM17Q9Y577 477 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 TAF6LQ9Y6J9 622 aa12.58□□□□□ -0.4
SSBP1-210ENST00000481508 COL11A1P12107 1806 aaPredicted RBP12.58□□□□□ -0.4
SSBP1-210ENST00000481508 PLIN4Q96Q06 1357 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 USP17L10C9JJH3 530 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 ALDH1A1P00352 501 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 MFAP1P55081 439 aaKnown RBP12.57□□□□□ -0.4
SSBP1-210ENST00000481508 ICA1Q05084 483 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 OTOP1Q7RTM1 612 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 CCDC17Q96LX7 622 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 FEZ1Q99689 392 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 TBC1D2Q9BYX2 928 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 RBM27Q9P2N5 1060 aaKnown RBP12.57□□□□□ -0.4
SSBP1-210ENST00000481508 AGTPBP1Q9UPW5 1226 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 DOCK3Q8IZD9 2030 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 NEDD4P46934 1319 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 A0A0G2JMZ2 1700 aa12.57□□□□□ -0.4
SSBP1-210ENST00000481508 SPTBN5Q9NRC6 3674 aaKnown RBP12.56□□□□□ -0.4
SSBP1-210ENST00000481508 NMT2O60551 498 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 PEX10O60683 326 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 FGRP09769 529 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 EEF2P13639 858 aaKnown RBP12.56□□□□□ -0.4
SSBP1-210ENST00000481508 TIE1P35590 1138 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 POTEEQ6S8J3 1075 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 FASTKD5Q7L8L6 764 aaKnown RBP12.56□□□□□ -0.4
SSBP1-210ENST00000481508 PROCA1Q8NCQ7 364 aaPredicted RBP12.56□□□□□ -0.4
SSBP1-210ENST00000481508 RUFY2Q8WXA3 655 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 CEP95Q96GE4 821 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 C12orf42Q96LP6 360 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 LSG1Q9H089 658 aaKnown RBP12.56□□□□□ -0.4
SSBP1-210ENST00000481508 KIAA1683Q9H0B3 1180 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 CPA4Q9UI42 421 aa12.56□□□□□ -0.4
SSBP1-210ENST00000481508 C19orf81C9J6K1 198 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 ORC4O43929 436 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 VCAM1P19320 739 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 TFAP4Q01664 338 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 PDE4BQ07343 736 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 OTUD7BQ6GQQ9 843 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 NEDD1Q8NHV4 660 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 STAG1Q8WVM7 1258 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 ZCCHC17Q9NP64 241 aaKnown RBP12.55□□□□□ -0.4
SSBP1-210ENST00000481508 IL17RBQ9NRM6 502 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 TMOD4Q9NZQ9 345 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 TMX2Q9Y320 296 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 EYSQ5T1H1 3165 aa12.55□□□□□ -0.4
SSBP1-210ENST00000481508 PLXNB2O15031 1838 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 TLR2O60603 784 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 CDC45O75419 566 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 ECM2O94769 699 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-210ENST00000481508 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
SSBP1-210ENST00000481508 CYP21A2P08686 494 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 CTGFP29279 349 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 ATP2B2Q01814 1243 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 COL9A3Q14050 684 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-210ENST00000481508 RRP12Q5JTH9 1297 aaKnown RBP12.54□□□□□ -0.4
SSBP1-210ENST00000481508 AKNAD1Q5T1N1 836 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 C17orf99Q6UX52 265 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 STOX1Q6ZVD7 989 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 RASGRP2Q7LDG7 609 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 ZNF444Q8N0Y2 327 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-210ENST00000481508 SPICE1Q8N0Z3 855 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 LRRC47Q8N1G4 583 aaKnown RBP12.54□□□□□ -0.4
SSBP1-210ENST00000481508 ARHGAP39Q9C0H5 1083 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 ASCC2Q9H1I8 757 aaPredicted RBP12.54□□□□□ -0.4
SSBP1-210ENST00000481508 KANSL2Q9H9L4 492 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 ZFYVE28Q9HCC9 887 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 SLC45A1Q9Y2W3 748 aa12.54□□□□□ -0.4
SSBP1-210ENST00000481508 ZNF213O14771 459 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 RANBP6O60518 1105 aaKnown RBP12.53□□□□□ -0.4
SSBP1-210ENST00000481508 TSPY3P0CV98 308 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 TSPY8P0CW00 308 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 BCRP11274 1271 aa12.53□□□□□ -0.4
SSBP1-210ENST00000481508 ATN1P54259 1190 aaPredicted RBP12.53□□□□□ -0.4
SSBP1-210ENST00000481508 NOM1Q5C9Z4 860 aaKnown RBP12.53□□□□□ -0.4
SSBP1-210ENST00000481508 CD99L2Q8TCZ2 262 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms