RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SH3GLB2Q9NR46 395 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 LRWD1Q9UFC0 647 aa21.74■■□□□ 1.07
CCM2-214ENST00000481194 A0A1B0GVL5 298 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 ARMC9Q7Z3E5 817 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 SLFN12Q8IYM2 578 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 MYO6Q9UM54 1294 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 RABGAP1Q9Y3P9 1069 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 ADCY5O95622 1261 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 SBK1Q52WX2 424 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 NEK8Q86SG6 692 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 NT5C3AQ9H0P0 336 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 PCDHA4Q9UN74 947 aa21.73■■□□□ 1.07
CCM2-214ENST00000481194 CFBP00751 764 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 ZSCAN30Q86W11 494 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 NUP88Q99567 741 aaPredicted RBP21.72■■□□□ 1.07
CCM2-214ENST00000481194 CNNM4Q6P4Q7 775 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 CTR9Q6PD62 1173 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 DYNLL2Q96FJ2 89 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 BICD1Q96G01 975 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 ZNF277Q9NRM2 450 aaPredicted RBP21.72■■□□□ 1.07
CCM2-214ENST00000481194 SLC5A4Q9NY91 659 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 BMP3P12645 472 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 PRKG1Q13976 671 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 KIAA1328Q86T90 577 aa21.72■■□□□ 1.07
CCM2-214ENST00000481194 IREB2P48200 963 aaKnown RBP21.71■■□□□ 1.07
CCM2-214ENST00000481194 KRT13P13646 458 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 TXKP42681 527 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 TGFB2P61812 414 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 NEDD4P46934 1319 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 ASNSP08243 561 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 CCDC172P0C7W6 258 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 CPXCR1Q8N123 301 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 DNAJC25Q9H1X3 360 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 LMBRD1Q9NUN5 540 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 N4BP3O15049 544 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 KRT26Q7Z3Y9 468 aa21.71■■□□□ 1.07
CCM2-214ENST00000481194 BIN2Q9UBW5 565 aaPredicted RBP21.71■■□□□ 1.07
CCM2-214ENST00000481194 MTFR1LQ9H019 292 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 PHRF1Q9P1Y6 1649 aaKnown RBP21.7■■□□□ 1.06
CCM2-214ENST00000481194 R3HDM1Q15032 1099 aaKnown RBP21.7■■□□□ 1.06
CCM2-214ENST00000481194 HS2ST1Q7LGA3 356 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 RTEL1Q9NZ71 1219 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 GOLGA8HP0CJ92 632 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 GNPTABQ3T906 1256 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 ISM2Q6H9L7 571 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 AOPEPQ8N6M6 819 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 HERC5Q9UII4 1024 aaKnown RBP21.7■■□□□ 1.06
CCM2-214ENST00000481194 FGFR2P21802 821 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 UBASH3AP57075 661 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 KCNG1Q9UIX4 513 aa21.7■■□□□ 1.06
CCM2-214ENST00000481194 CYP2D7A0A087X1C5 515 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 ARHGAP29Q52LW3 1261 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 BRDTQ58F21 947 aaPredicted RBP21.69■■□□□ 1.06
CCM2-214ENST00000481194 NSMFQ6X4W1 530 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 TMC6Q7Z403 805 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 BACH1O14867 736 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 HDLBPQ00341 1268 aaKnown RBP21.69■■□□□ 1.06
CCM2-214ENST00000481194 ZFYVE27Q5T4F4 411 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 IQCEQ6IPM2 695 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 SNX29Q8TEQ0 813 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 hCG_1642624A0A1W2PR95 340 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 GOLGA6L9A6NEM1 432 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 FLOT1O75955 427 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 GCFC2P16383 781 aaKnown RBP21.69■■□□□ 1.06
CCM2-214ENST00000481194 CABP7Q86V35 215 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 ZNF341Q9BYN7 854 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 PCDHA1Q9Y5I3 950 aa21.69■■□□□ 1.06
CCM2-214ENST00000481194 PPP6R2O75170 966 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 ZNF202O95125 648 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 RPL13P26373 211 aaKnown RBP21.68■■□□□ 1.06
CCM2-214ENST00000481194 TOB2Q14106 344 aaPredicted RBP21.68■■□□□ 1.06
CCM2-214ENST00000481194 SYDE2Q5VT97 1194 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 TCERG1LQ5VWI1 586 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 SEPT11Q9NVA2 429 aaKnown RBP21.68■■□□□ 1.06
CCM2-214ENST00000481194 RPS12P25398 132 aaKnown RBP21.68■■□□□ 1.06
CCM2-214ENST00000481194 MLKLQ8NB16 471 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 ACBD3Q9H3P7 528 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 STAT2P52630 851 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 CHMP4BP1P59074 171 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 CMTR1Q8N1G2 835 aaKnown RBP21.68■■□□□ 1.06
CCM2-214ENST00000481194 GDF11O95390 407 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 MMP1P03956 469 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 OR52Z1P0C646 297 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 OSBPP22059 807 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 APBB1IPQ7Z5R6 666 aaPredicted RBP21.68■■□□□ 1.06
CCM2-214ENST00000481194 CCDC112Q8NEF3 446 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 MAGEF1Q9HAY2 307 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 POLR3EQ9NVU0 708 aa21.68■■□□□ 1.06
CCM2-214ENST00000481194 A0A1W2PQ27 194 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 A0A1W2PQ64 194 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 A0A1W2PQD8 194 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 POLRMTO00411 1230 aaKnown RBP21.67■■□□□ 1.06
CCM2-214ENST00000481194 CMA1P23946 247 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 LONP1P36776 959 aaKnown RBP21.67■■□□□ 1.06
CCM2-214ENST00000481194 SLC4A9Q96Q91 983 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 ENTPD3O75355 529 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 A0A0G2JLW4 131 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 MYCLP12524 364 aaPredicted RBP21.67■■□□□ 1.06
CCM2-214ENST00000481194 FAM173BQ6P4H8 233 aa21.67■■□□□ 1.06
CCM2-214ENST00000481194 FAM177A1Q8N128 213 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms