RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 MSCO60682 206 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 TFRCP02786 760 aaKnown RBP13.67□□□□□ -0.22
CCM2-213ENST00000480658 APPP05067 770 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 GUCY1A2P33402 732 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 SHROOM1Q2M3G4 852 aaPredicted RBP13.67□□□□□ -0.22
CCM2-213ENST00000480658 ACER1Q8TDN7 264 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 UNC93B1Q9H1C4 597 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 MROH8Q9H579 483 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 TXNRD2Q9NNW7 524 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 ZNF236Q9UL36 1845 aa13.67□□□□□ -0.22
CCM2-213ENST00000480658 PATL2C9JE40 543 aaKnown RBP13.66□□□□□ -0.22
CCM2-213ENST00000480658 PRKAB2O43741 272 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 FLOT1O75955 427 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 SLC25A27O95847 323 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 NT5C2P49902 561 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 MAP2K5Q13163 448 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 MFSD14CQ5VZR4 134 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 ZNF444Q8N0Y2 327 aaPredicted RBP13.66□□□□□ -0.22
CCM2-213ENST00000480658 ABRAQ8N0Z2 381 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 PI4K2BQ8TCG2 481 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 SHISA4Q96DD7 197 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 DEFB118Q96PH6 123 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 CRISPLD2Q9H0B8 497 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 NAPBQ9H115 298 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 A0A0G2JMZ2 1700 aa13.66□□□□□ -0.22
CCM2-213ENST00000480658 GSG1L2A8MUP6 293 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 HOXC6P09630 235 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 CYP2D6P10635 497 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 AKR1B1P15121 316 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 CYP2B6P20813 491 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 MFAP1P55081 439 aaKnown RBP13.65□□□□□ -0.22
CCM2-213ENST00000480658 GRB14Q14449 540 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 MORN1Q5T089 497 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 MAP3K21Q5TCX8 1036 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 ANKRD45Q5TZF3 282 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 WDR78Q5VTH9 848 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 NECAB2Q7Z6G3 386 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 SLC44A5Q8NCS7 719 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 OSBP2Q969R2 916 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 DYNLL2Q96FJ2 89 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 CRBNQ96SW2 442 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 NYAP2Q9P242 653 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 STAP2Q9UGK3 403 aa13.65□□□□□ -0.22
CCM2-213ENST00000480658 PLIN4Q96Q06 1357 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 A0A1W2PRG0 241 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 MINDY4BA8MYZ0 360 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 SLC34A2O95436 690 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 PRKAR2AP13861 404 aaKnown RBP13.64□□□□□ -0.23
CCM2-213ENST00000480658 PTPREP23469 700 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 DSG3P32926 999 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 UBE2Q1Q7Z7E8 422 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 TRIB2Q92519 343 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 USP6NLQ92738 828 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 DPF3Q92784 378 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 YTHDC1Q96MU7 727 aaKnown RBP13.64□□□□□ -0.23
CCM2-213ENST00000480658 SPATC1LQ9H0A9 340 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 PORCNQ9H237 461 aa13.64□□□□□ -0.23
CCM2-213ENST00000480658 BAZ2AQ9UIF9 1905 aaKnown RBP13.63□□□□□ -0.23
CCM2-213ENST00000480658 FDX1P10109 184 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 EEF2P13639 858 aaKnown RBP13.63□□□□□ -0.23
CCM2-213ENST00000480658 ATP2B2Q01814 1243 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 Q3C1V9 767 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 ZMYM1Q5SVZ6 1142 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 DPP9Q86TI2 863 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 IFNL3Q8IZI9 196 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 NBPF3Q9H094 633 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 HELLSQ9NRZ9 838 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 KIAA0100Q14667 2235 aaKnown RBP13.63□□□□□ -0.23
CCM2-213ENST00000480658 SALL3Q9BXA9 1300 aa13.63□□□□□ -0.23
CCM2-213ENST00000480658 CNMDO75829 334 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 TTLL1O95922 423 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 TSPY3P0CV98 308 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 TSPY8P0CW00 308 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 FCER1AP12319 257 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 PDE1AP54750 535 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 TSHZ3Q63HK5 1081 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 OLFML2BQ68BL8 750 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 ZMYM6O95789 1325 aa13.62□□□□□ -0.23
CCM2-213ENST00000480658 GREB1LQ9C091 1923 aaPredicted RBP13.61□□□□□ -0.23
CCM2-213ENST00000480658 CYP2D7A0A087X1C5 515 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 M0R2C6 588 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 HIP1O00291 1037 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 EVI5O60447 810 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 PCP11498 1178 aaKnown RBP13.61□□□□□ -0.23
CCM2-213ENST00000480658 RASA1P20936 1047 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 SLFNL1Q499Z3 407 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 GMCL1P1Q8NEA9 526 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 SLF1Q9BQI6 1058 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 MOV10L1Q9BXT6 1211 aaKnown RBP13.61□□□□□ -0.23
CCM2-213ENST00000480658 BTBD7Q9P203 1132 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 NRBP1Q9UHY1 535 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 OGDHLQ9ULD0 1010 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 PPP1R9AQ9ULJ8 1098 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 CTDP1Q9Y5B0 961 aaPredicted RBP13.61□□□□□ -0.23
CCM2-213ENST00000480658 PLXNB2O15031 1838 aa13.61□□□□□ -0.23
CCM2-213ENST00000480658 A0A1W2PPC1 479 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 RAD21O60216 631 aa13.6□□□□□ -0.23
CCM2-213ENST00000480658 ERCC3P19447 782 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms