RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 NFXL1Q6ZNB6 911 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 Q6ZUG5 572 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 RASAL3Q86YV0 1011 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 LRRC47Q8N1G4 583 aaKnown RBP13.13□□□□□ -0.31
CLDN11-205ENST00000480067 KIF2CQ99661 725 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 TMEM47Q9BQJ4 181 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 KIAA1683Q9H0B3 1180 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 GOPCQ9HD26 462 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 SYNPO2Q9UMS6 1093 aa13.13□□□□□ -0.31
CLDN11-205ENST00000480067 F5H6K3 240 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 SH2B2O14492 632 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-205ENST00000480067 SLC10A3P09131 477 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 LIFRP42702 1097 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 KLRC3Q07444 240 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 RABEP1Q15276 862 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 USP17L2Q6R6M4 530 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 LY9Q9HBG7 655 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 GPHNQ9NQX3 736 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-205ENST00000480067 TMOD4Q9NZQ9 345 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 KCNH4Q9UQ05 1017 aa13.12□□□□□ -0.31
CLDN11-205ENST00000480067 CCDC69A6NI79 296 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 CETPP11597 493 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 HMGCS2P54868 508 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 SYNE3Q6ZMZ3 975 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 FASTKD5Q7L8L6 764 aaKnown RBP13.11□□□□□ -0.31
CLDN11-205ENST00000480067 CATIPQ7Z7H3 387 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 CAPNS2Q96L46 248 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 VCPKMTQ9H867 229 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 MTMR7Q9Y216 660 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 MYH8P13535 1937 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 A0A0G2JLL6 359 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-205ENST00000480067 FAM155AB1AL88 458 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-205ENST00000480067 NOGQ13253 232 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 ANKRD1Q15327 319 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 SH3D19Q5HYK7 790 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 PRRT2Q7Z6L0 340 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-205ENST00000480067 SPICE1Q8N0Z3 855 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 FBXL16Q8N461 479 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 GMCL1P1Q8NEA9 526 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 LPAR1Q92633 364 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 BRF1Q92994 677 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 SENP2Q9HC62 589 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 EMILIN3Q9NT22 766 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 SLC12A7Q9Y666 1083 aa13.11□□□□□ -0.31
CLDN11-205ENST00000480067 DOCK1Q14185 1865 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 CCL15-CCL14A0A0B4J2E2 113 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 MANSC4A6NHS7 340 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-205ENST00000480067 ST18O60284 1047 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 INHBEP58166 350 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 CCL15Q16663 113 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 SLFN13Q68D06 897 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 GADL1Q6ZQY3 521 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 SGMS1Q86VZ5 419 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
CLDN11-205ENST00000480067 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-205ENST00000480067 NAP1L2Q9ULW6 460 aaPredicted RBP13.1□□□□□ -0.31
CLDN11-205ENST00000480067 OTOFQ9HC10 1997 aa13.09□□□□□ -0.31
CLDN11-205ENST00000480067 NDUFB10O96000 172 aa13.09□□□□□ -0.31
CLDN11-205ENST00000480067 SLC1A4P43007 532 aa13.09□□□□□ -0.31
CLDN11-205ENST00000480067 DGKZQ13574 1117 aa13.09□□□□□ -0.31
CLDN11-205ENST00000480067 PROCA1Q8NCQ7 364 aaPredicted RBP13.09□□□□□ -0.31
CLDN11-205ENST00000480067 AGXT2Q9BYV1 514 aa13.09□□□□□ -0.31
CLDN11-205ENST00000480067 ISY1Q9ULR0 285 aaKnown RBP13.09□□□□□ -0.31
CLDN11-205ENST00000480067 WDR33Q9C0J8 1336 aaKnown RBP13.09□□□□□ -0.31
CLDN11-205ENST00000480067 KLF18A0A0U1RQI7 1052 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 VCAM1P19320 739 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 VEGFBP49765 207 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 AK2P54819 239 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 KIF23Q02241 960 aaPredicted RBP13.08□□□□□ -0.32
CLDN11-205ENST00000480067 APOBRQ0VD83 1088 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 SREBF2Q12772 1141 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 TOB2Q14106 344 aaPredicted RBP13.08□□□□□ -0.32
CLDN11-205ENST00000480067 KIAA1755Q5JYT7 1200 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 ZNF654Q8IZM8 581 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 NUP133Q8WUM0 1156 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 BRI3BPQ8WY22 251 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 GMCL1Q96IK5 515 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 C12orf42Q96LP6 360 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 LARP6Q9BRS8 491 aaKnown RBP13.08□□□□□ -0.32
CLDN11-205ENST00000480067 ATAD5Q96QE3 1844 aa13.08□□□□□ -0.32
CLDN11-205ENST00000480067 WDR46O15213 610 aaKnown RBP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 ZBTB43O43298 467 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 AOC2O75106 756 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 CALM1P0DP23 149 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 CALM2P0DP24 149 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 CALM3P0DP25 149 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 PDHBP11177 359 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 BMP3P12645 472 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 MAP2K2P36507 400 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 TROAPQ12815 778 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 PABPC4Q13310 644 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 DCAF4Q8WV16 495 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
CLDN11-205ENST00000480067 BRPF3Q9ULD4 1205 aa13.07□□□□□ -0.32
CLDN11-205ENST00000480067 AGTPBP1Q9UPW5 1226 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms