RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 ZMYM1Q5SVZ6 1142 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 GPATCH4Q5T3I0 446 aaKnown RBP6.77□□□□□ -1.33
CPS1-207ENST00000479988 ERO1BQ86YB8 467 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 FAM151AQ8WW52 585 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 KCNB2Q92953 911 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 B4E1Z4 1266 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 KBTBD13C9JR72 458 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 IPO7O95373 1038 aaKnown RBP6.77□□□□□ -1.33
CPS1-207ENST00000479988 TTLL1O95922 423 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 BMP3P12645 472 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 DESP17661 470 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 MCTP2Q6DN12 878 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 HHIPL2Q6UWX4 724 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 CNPY4Q8N129 248 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 LRRC47Q8N1G4 583 aaKnown RBP6.77□□□□□ -1.33
CPS1-207ENST00000479988 BICD1Q96G01 975 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 PPP1R9BQ96SB3 815 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 ZKSCAN3Q9BRR0 538 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 ZC3H4Q9UPT8 1303 aaKnown RBP6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L15C9J2P7 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 C19orf81C9J6K1 198 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L13C9JLJ4 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L11C9JVI0 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L18D6R9N7 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L22D6RA61 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L17D6RBQ6 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L19D6RCP7 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L20D6RJB6 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 HOXA10P31260 410 aaPredicted RBP6.77□□□□□ -1.33
CPS1-207ENST00000479988 USP17L24Q0WX57 530 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 TAF12Q16514 161 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 RAB11FIP4Q86YS3 637 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 CCDC150Q8NCX0 1101 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 NMRK2Q9NPI5 230 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 MROH7-TTC4A0A0A0MT08 1334 aa6.77□□□□□ -1.33
CPS1-207ENST00000479988 TLR3O15455 904 aaKnown RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 UBA7P41226 1012 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 VASPP50552 380 aaPredicted RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 FKBP1BP68106 108 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 DNM1Q05193 864 aaKnown RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 AKNAD1Q5T1N1 836 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 CCDC129Q6ZRS4 1044 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 FBXO11Q86XK2 927 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 DPF3Q92784 378 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 ZBED2Q9BTP6 218 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 UBA5Q9GZZ9 404 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 ANO10Q9NW15 660 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 GPRC5DQ9NZD1 345 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 PKD2L1Q9P0L9 805 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 RGPD8O14715 1765 aaPredicted RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 TBCAO75347 108 aaKnown RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 ME3Q16798 604 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 PRAMEF18Q5VWM3 479 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 RGMBQ6NW40 437 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 OLFM4Q6UX06 510 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 BRAPQ7Z569 592 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 CEP57L1Q8IYX8 460 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 KCNG4Q8TDN1 519 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 GTF3C6Q969F1 213 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 FAM84BQ96KN1 310 aaPredicted RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 GDPD2Q9HCC8 539 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 MTMR6Q9Y217 621 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 ELP1O95163 1332 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 TFRCP02786 760 aaKnown RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 FDX1P10109 184 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 NT5C2P49902 561 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 CEBPZQ03701 1054 aaKnown RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 PPP2R5BQ15173 497 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 FAM47AQ5JRC9 791 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 EPHA10Q5JZY3 1008 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 IFNL3Q8IZI9 196 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 LARP6Q9BRS8 491 aaKnown RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 TRIM5Q9C035 493 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 RGS17Q9UGC6 210 aaPredicted RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 ZBTB21Q9ULJ3 1066 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 TRIM17Q9Y577 477 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 MED23Q9ULK4 1368 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 KDM6AO15550 1401 aaPredicted RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 TESPA1A2RU30 521 aaPredicted RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 FCER1AP12319 257 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 TM4SF1P30408 202 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 STAT2P52630 851 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 MTERF4Q7Z6M4 381 aaKnown RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 RGS22Q8NE09 1264 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 MAP7D2Q96T17 732 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 PANK2Q9BZ23 570 aa6.76□□□□□ -1.33
CPS1-207ENST00000479988 MAGEC2Q9UBF1 373 aaPredicted RBP6.76□□□□□ -1.33
CPS1-207ENST00000479988 GCOM1H8Y6P7 765 aaPredicted RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 SNAP23O00161 211 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 PFKFB2O60825 505 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 POLR2MP0CAP2 368 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 NUDT12Q9BQG2 462 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 LRRC27Q9C0I9 530 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 PRDM5Q9NQX1 630 aaPredicted RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 MRVI1Q9Y6F6 885 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 NDUFB9Q9Y6M9 179 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 BMP15O95972 392 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 SKIV2LQ15477 1246 aaKnown RBP6.75□□□□□ -1.33
CPS1-207ENST00000479988 SLC9C1Q4G0N8 1177 aa6.75□□□□□ -1.33
CPS1-207ENST00000479988 FAM200AQ8TCP9 573 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms