RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 SMARCC2Q8TAQ2 1214 aa16.53■□□□□ 0.24
RPP40-205ENST00000479782 SH2D4AQ9H788 454 aa16.53■□□□□ 0.24
RPP40-205ENST00000479782 FAM217BQ9NTX9 383 aaPredicted RBP16.53■□□□□ 0.24
RPP40-205ENST00000479782 USP2O75604 605 aaPredicted RBP16.52■□□□□ 0.24
RPP40-205ENST00000479782 IREB2P48200 963 aaKnown RBP16.52■□□□□ 0.24
RPP40-205ENST00000479782 GRM4Q14833 912 aa16.52■□□□□ 0.24
RPP40-205ENST00000479782 MAP1SQ66K74 1059 aaPredicted RBP16.52■□□□□ 0.24
RPP40-205ENST00000479782 SIAH1Q8IUQ4 282 aa16.52■□□□□ 0.24
RPP40-205ENST00000479782 CCDC144CPQ8IYA2 1237 aa16.52■□□□□ 0.24
RPP40-205ENST00000479782 NSUN7Q8NE18 718 aaKnown RBP16.52■□□□□ 0.24
RPP40-205ENST00000479782 GMCL1P1Q8NEA9 526 aa16.52■□□□□ 0.24
RPP40-205ENST00000479782 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.52■□□□□ 0.24
RPP40-205ENST00000479782 ZNF526Q8TF50 670 aaPredicted RBP16.52■□□□□ 0.24
RPP40-205ENST00000479782 KIF3AQ9Y496 699 aa16.52■□□□□ 0.24
RPP40-205ENST00000479782 OTOFQ9HC10 1997 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 USP17L5A8MUK1 530 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 SNHG28P0DPA3 235 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 IFNAR1P17181 557 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 GJB2P29033 226 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 INPP5BP32019 993 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 ADD1P35611 737 aaKnown RBP16.51■□□□□ 0.23
RPP40-205ENST00000479782 GNAQP50148 359 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 NTRK3Q16288 839 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 MAP3K11Q16584 847 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 LRRC47Q8N1G4 583 aaKnown RBP16.51■□□□□ 0.23
RPP40-205ENST00000479782 LZTS2Q9BRK4 669 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 PICK1Q9NRD5 415 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 TMX2Q9Y320 296 aa16.51■□□□□ 0.23
RPP40-205ENST00000479782 PTPDC1A2A3K4 754 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 PARP1P09874 1014 aaKnown RBP16.5■□□□□ 0.23
RPP40-205ENST00000479782 PDHBP11177 359 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 PDIA4P13667 645 aaKnown RBP16.5■□□□□ 0.23
RPP40-205ENST00000479782 DDIT3P35638 169 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 MAP3K9P80192 1104 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 ASPRV1Q53RT3 343 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 DLK2Q6UY11 383 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 TMTC3Q6ZXV5 915 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 DCAF4Q8WV16 495 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 AS3MTQ9HBK9 375 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 GOPCQ9HD26 462 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 MAD2L2Q9UI95 211 aa16.5■□□□□ 0.23
RPP40-205ENST00000479782 CIZ1Q9ULV3 898 aaPredicted RBP16.5■□□□□ 0.23
RPP40-205ENST00000479782 STK36Q9NRP7 1315 aa16.49■□□□□ 0.23
RPP40-205ENST00000479782 PALM3A6NDB9 673 aaPredicted RBP16.49■□□□□ 0.23
RPP40-205ENST00000479782 UNCXA6NJT0 531 aa16.49■□□□□ 0.23
RPP40-205ENST00000479782 PTPRAP18433 802 aa16.49■□□□□ 0.23
RPP40-205ENST00000479782 PDCP20941 246 aa16.49■□□□□ 0.23
RPP40-205ENST00000479782 PRKG1Q13976 671 aa16.49■□□□□ 0.23
RPP40-205ENST00000479782 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
RPP40-205ENST00000479782 ARMC9Q7Z3E5 817 aa16.49■□□□□ 0.23
RPP40-205ENST00000479782 ZKSCAN4Q969J2 545 aaPredicted RBP16.49■□□□□ 0.23
RPP40-205ENST00000479782 CSADQ9Y600 493 aa16.49■□□□□ 0.23
RPP40-205ENST00000479782 PHIPQ8WWQ0 1821 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 A0A1W2PRG0 241 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 JAK2O60674 1132 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 FMNL1O95466 1100 aaPredicted RBP16.48■□□□□ 0.23
RPP40-205ENST00000479782 SMARCA1P28370 1054 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 FKBP1BP68106 108 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 SSRP1Q08945 709 aaKnown RBP16.48■□□□□ 0.23
RPP40-205ENST00000479782 CHADLQ6NUI6 762 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 TRIM22Q8IYM9 498 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 ANKRD13AQ8IZ07 590 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 GMCL1Q96IK5 515 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 WDR18Q9BV38 432 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 RNF26Q9BY78 433 aaPredicted RBP16.48■□□□□ 0.23
RPP40-205ENST00000479782 GPBP1L1Q9HC44 474 aaPredicted RBP16.48■□□□□ 0.23
RPP40-205ENST00000479782 RBM27Q9P2N5 1060 aaKnown RBP16.48■□□□□ 0.23
RPP40-205ENST00000479782 FZD1Q9UP38 647 aa16.48■□□□□ 0.23
RPP40-205ENST00000479782 F5H6K3 240 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 ECE1P42892 770 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 SLC1A4P43007 532 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 KLRC3Q07444 240 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 ZNF543Q08ER8 600 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 FUT2Q10981 343 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 VGLL4Q14135 290 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 TTLL12Q14166 644 aaPredicted RBP16.47■□□□□ 0.23
RPP40-205ENST00000479782 SLFN13Q68D06 897 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.47■□□□□ 0.23
RPP40-205ENST00000479782 NBPF11Q86T75 865 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 STAG2Q8N3U4 1231 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 FAM184AQ8NB25 1140 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 ACER1Q8TDN7 264 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 WASF1Q92558 559 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 KIAA1683Q9H0B3 1180 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 VCPKMTQ9H867 229 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 CHMP5Q9NZZ3 219 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.47■□□□□ 0.23
RPP40-205ENST00000479782 MTMR7Q9Y216 660 aa16.47■□□□□ 0.23
RPP40-205ENST00000479782 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 KLRF2D3W0D1 207 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 PRPF3O43395 683 aaKnown RBP16.46■□□□□ 0.23
RPP40-205ENST00000479782 PLEKHA8P1O95397 391 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 FDPSP14324 419 aaKnown RBP16.46■□□□□ 0.23
RPP40-205ENST00000479782 USP14P54578 494 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 CCDC96Q2M329 555 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 SRBD1Q8N5C6 995 aaKnown RBP16.46■□□□□ 0.23
RPP40-205ENST00000479782 ZNF280CQ8ND82 737 aa16.46■□□□□ 0.23
RPP40-205ENST00000479782 RGS22Q8NE09 1264 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms