RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 SMIM22K7EJ46 135 aa17.2■□□□□ 0.34
ATG4B-218ENST00000479554 PRKAR2AP13861 404 aaKnown RBP17.2■□□□□ 0.34
ATG4B-218ENST00000479554 MAP3K21Q5TCX8 1036 aa17.2■□□□□ 0.34
ATG4B-218ENST00000479554 CTR9Q6PD62 1173 aa17.2■□□□□ 0.34
ATG4B-218ENST00000479554 CLEC10AQ8IUN9 316 aa17.2■□□□□ 0.34
ATG4B-218ENST00000479554 APPBP2Q92624 585 aa17.2■□□□□ 0.34
ATG4B-218ENST00000479554 LPAR1Q92633 364 aa17.2■□□□□ 0.34
ATG4B-218ENST00000479554 BTBD7Q9P203 1132 aa17.2■□□□□ 0.34
ATG4B-218ENST00000479554 PCDHB15Q9Y5E8 787 aa17.2■□□□□ 0.34
ATG4B-218ENST00000479554 ZFYP08048 801 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-218ENST00000479554 MAP2K5Q13163 448 aa17.19■□□□□ 0.34
ATG4B-218ENST00000479554 ANKLE1Q8NAG6 615 aa17.19■□□□□ 0.34
ATG4B-218ENST00000479554 STRBPQ96SI9 672 aaKnown RBP17.19■□□□□ 0.34
ATG4B-218ENST00000479554 IVNS1ABPQ9Y6Y0 642 aa17.19■□□□□ 0.34
ATG4B-218ENST00000479554 TTC41PQ6P2S7 1318 aa17.19■□□□□ 0.34
ATG4B-218ENST00000479554 CEP290O15078 2479 aa17.19■□□□□ 0.34
ATG4B-218ENST00000479554 A0A0G2JMZ2 1700 aa17.18■□□□□ 0.34
ATG4B-218ENST00000479554 RNF113AO15541 343 aaKnown RBP17.18■□□□□ 0.34
ATG4B-218ENST00000479554 COG2Q14746 738 aa17.18■□□□□ 0.34
ATG4B-218ENST00000479554 CCL14Q16627 93 aa17.18■□□□□ 0.34
ATG4B-218ENST00000479554 OSBP2Q969R2 916 aa17.18■□□□□ 0.34
ATG4B-218ENST00000479554 PAWRQ96IZ0 340 aaKnown RBP17.18■□□□□ 0.34
ATG4B-218ENST00000479554 VCPKMTQ9H867 229 aa17.18■□□□□ 0.34
ATG4B-218ENST00000479554 HOXC10Q9NYD6 342 aa17.18■□□□□ 0.34
ATG4B-218ENST00000479554 COLQQ9Y215 455 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-218ENST00000479554 TMX2Q9Y320 296 aa17.18■□□□□ 0.34
ATG4B-218ENST00000479554 NR2E3Q9Y5X4 410 aa17.18■□□□□ 0.34
ATG4B-218ENST00000479554 SLC15A5A6NIM6 579 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 ERC2O15083 957 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 PTPREP23469 700 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 ATP2B2Q01814 1243 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 CACNB2Q08289 660 aaPredicted RBP17.17■□□□□ 0.34
ATG4B-218ENST00000479554 LRRFIP1Q32MZ4 808 aaKnown RBP17.17■□□□□ 0.34
ATG4B-218ENST00000479554 KIAA1755Q5JYT7 1200 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 GIMAP6Q6P9H5 292 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 NECAB2Q7Z6G3 386 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 SIAH1Q8IUQ4 282 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 SPICE1Q8N0Z3 855 aa17.17■□□□□ 0.34
ATG4B-218ENST00000479554 DIS3LQ8TF46 1054 aaKnown RBP17.17■□□□□ 0.34
ATG4B-218ENST00000479554 GSG1L2A8MUP6 293 aa17.16■□□□□ 0.34
ATG4B-218ENST00000479554 WDR46O15213 610 aaKnown RBP17.16■□□□□ 0.34
ATG4B-218ENST00000479554 GPAA1O43292 621 aa17.16■□□□□ 0.34
ATG4B-218ENST00000479554 FLOT1O75955 427 aa17.16■□□□□ 0.34
ATG4B-218ENST00000479554 EEF2P13639 858 aaKnown RBP17.16■□□□□ 0.34
ATG4B-218ENST00000479554 GRB14Q14449 540 aa17.16■□□□□ 0.34
ATG4B-218ENST00000479554 SBK1Q52WX2 424 aa17.16■□□□□ 0.34
ATG4B-218ENST00000479554 CHRDL2Q6WN34 429 aa17.16■□□□□ 0.34
ATG4B-218ENST00000479554 MB21D1Q8N884 522 aa17.16■□□□□ 0.34
ATG4B-218ENST00000479554 KANSL2Q9H9L4 492 aa17.16■□□□□ 0.34
ATG4B-218ENST00000479554 ROBO3Q96MS0 1386 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 ZNF236Q9UL36 1845 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 EVI5O60447 810 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 GNAT2P19087 354 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 DSG3P32926 999 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 TDO2P48775 406 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 PI4K2BQ8TCG2 481 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 MOV10L1Q9BXT6 1211 aaKnown RBP17.15■□□□□ 0.34
ATG4B-218ENST00000479554 SPATC1LQ9H0A9 340 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 ZBTB47Q9UFB7 747 aaPredicted RBP17.15■□□□□ 0.34
ATG4B-218ENST00000479554 OGDHLQ9ULD0 1010 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 RLFQ13129 1914 aa17.15■□□□□ 0.34
ATG4B-218ENST00000479554 RANBP2P49792 3224 aaKnown RBP17.15■□□□□ 0.34
ATG4B-218ENST00000479554 MINDY4BA8MYZ0 360 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 M0R2C6 588 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 MX1P20591 662 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 CCND3P30281 292 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-218ENST00000479554 PLS1Q14651 629 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 MFSD14CQ5VZR4 134 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 SAMD1Q6SPF0 538 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-218ENST00000479554 STK11IPQ8N1F8 1099 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 SHCBP1Q8NEM2 672 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 OTUD7AQ8TE49 926 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-218ENST00000479554 ATG4CQ96DT6 458 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 FSD1Q9BTV5 496 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 NBPF3Q9H094 633 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 MKNK2Q9HBH9 465 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 EPB41L4AQ9HCS5 686 aaPredicted RBP17.14■□□□□ 0.33
ATG4B-218ENST00000479554 GOPCQ9HD26 462 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 FLRT1Q9NZU1 646 aa17.14■□□□□ 0.33
ATG4B-218ENST00000479554 GREB1LQ9C091 1923 aaPredicted RBP17.13■□□□□ 0.33
ATG4B-218ENST00000479554 PARP14Q460N5 1801 aa17.13■□□□□ 0.33
ATG4B-218ENST00000479554 RAD21O60216 631 aa17.13■□□□□ 0.33
ATG4B-218ENST00000479554 APPP05067 770 aa17.13■□□□□ 0.33
ATG4B-218ENST00000479554 HOXC6P09630 235 aa17.13■□□□□ 0.33
ATG4B-218ENST00000479554 RASA1P20936 1047 aa17.13■□□□□ 0.33
ATG4B-218ENST00000479554 C11orf49Q9H6J7 331 aa17.13■□□□□ 0.33
ATG4B-218ENST00000479554 ALPK3Q96L96 1907 aa17.12■□□□□ 0.33
ATG4B-218ENST00000479554 STRNO43815 780 aa17.12■□□□□ 0.33
ATG4B-218ENST00000479554 ERCC3P19447 782 aa17.12■□□□□ 0.33
ATG4B-218ENST00000479554 ADORA2AP29274 412 aa17.12■□□□□ 0.33
ATG4B-218ENST00000479554 MNX1P50219 401 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-218ENST00000479554 FXR1P51114 621 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATG4B-218ENST00000479554 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
ATG4B-218ENST00000479554 DPP9Q86TI2 863 aa17.12■□□□□ 0.33
ATG4B-218ENST00000479554 NPLOC4Q8TAT6 608 aa17.12■□□□□ 0.33
ATG4B-218ENST00000479554 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.12■□□□□ 0.33
ATG4B-218ENST00000479554 NCAPG2Q86XI2 1143 aa17.11■□□□□ 0.33
ATG4B-218ENST00000479554 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
ATG4B-218ENST00000479554 NACAP1Q9BZK3 213 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms