RNA–Protein interactions for RNA: ENST00000479428.3

RN7SL546P-201, Transcript of RNA, 7SL, cytoplasmic 546, pseudogene, humanhuman

BASIC

Gene RN7SL546P, Length 290 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL546P-201ENST00000479428 USP14P54578 494 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 MLLT1Q03111 559 aaPredicted RBP12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 DGKZQ13574 1117 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 ADCK5Q3MIX3 580 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 USP17L2Q6R6M4 530 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 GADL1Q6ZQY3 521 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 C12orf42Q96LP6 360 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 ZSCAN10Q96SZ4 725 aaPredicted RBP12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 EMILIN3Q9NT22 766 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 TMOD4Q9NZQ9 345 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 SYNPO2Q9UMS6 1093 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 CASP8AP2Q9UKL3 1982 aa12.72□□□□□ -0.37
RN7SL546P-201ENST00000479428 PDE4DIPQ5VU43 2346 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 CCDC85CA6NKD9 419 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 BTBD19C9JJ37 291 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 IGF2BP3O00425 579 aaKnown RBP eCLIP12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 ANTXR2P58335 489 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 COL9A3Q14050 684 aaPredicted RBP12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 RCSD1Q6JBY9 416 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 GPAT2Q6NUI2 795 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 DGKHQ86XP1 1220 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 IFNL1Q8IU54 200 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 PROCA1Q8NCQ7 364 aaPredicted RBP12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 TTC14Q96N46 770 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 NEK1Q96PY6 1258 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 UBAC1Q9BSL1 405 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 VCPKMTQ9H867 229 aa12.71□□□□□ -0.37
RN7SL546P-201ENST00000479428 TNKSO95271 1327 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 TOP1P11387 765 aaKnown RBP12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 VCAM1P19320 739 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 MCM5P33992 734 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 KIAA1755Q5JYT7 1200 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 TREML2Q5T2D2 321 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 CHST3Q7LGC8 479 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 ANKRD23Q86SG2 305 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 ENAHQ8N8S7 591 aaPredicted RBP12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 ANKS1AQ92625 1134 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 LPAR1Q92633 364 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 JAKMIP1Q96N16 626 aaKnown RBP12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 TMEM47Q9BQJ4 181 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 GOPCQ9HD26 462 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 AGTPBP1Q9UPW5 1226 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 LOC285556D6RIA3 1793 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 MYH4Q9Y623 1939 aa12.7□□□□□ -0.38
RN7SL546P-201ENST00000479428 F5H6K3 240 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 IFIT3O14879 490 aaKnown RBP12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 PRC1O43663 620 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 HMGB1P09429 215 aaKnown RBP12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 PSMA5P28066 241 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 ANAPC15P60006 121 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 KLRC3Q07444 240 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 SART3Q15020 963 aaKnown RBP12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 SEC23AQ15436 765 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 OTUD7BQ6GQQ9 843 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 DHX32Q7L7V1 743 aaKnown RBP12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 SPICE1Q8N0Z3 855 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 GMCL1P1Q8NEA9 526 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 MTA3Q9BTC8 594 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 BACH2Q9BYV9 841 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 ZCCHC17Q9NP64 241 aaKnown RBP12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 SLC45A1Q9Y2W3 748 aa12.69□□□□□ -0.38
RN7SL546P-201ENST00000479428 ERICH2A1L162 156 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 PDHXO00330 501 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 RAD21O60216 631 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 NDUFB10O96000 172 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 ALDH1A1P00352 501 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 EXOSC10Q01780 885 aaKnown RBP12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 PABPC4Q13310 644 aaKnown RBP eCLIP12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 TMEM67Q5HYA8 995 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 IFIT1BQ5T764 474 aaKnown RBP12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 SLFN13Q68D06 897 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 IGDCC4Q8TDY8 1250 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 TMEM87BQ96K49 555 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 KAT14Q9H8E8 782 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 RNF186Q9NXI6 227 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 HTTP42858 3142 aa12.68□□□□□ -0.38
RN7SL546P-201ENST00000479428 WDR19Q8NEZ3 1342 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 SH2B2O14492 632 aaPredicted RBP12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 WDR46O15213 610 aaKnown RBP12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 CPA1P15085 419 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 CASTP20810 708 aaKnown RBP12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 HOXA7P31268 230 aaPredicted RBP12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 WTAPQ15007 396 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 BLOC1S2Q6QNY1 142 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 IL17RAQ96F46 866 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 TCEANC2Q96MN5 208 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 LRRC2Q9BYS8 371 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 TM6SF1Q9BZW5 370 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 UPF2Q9HAU5 1272 aaKnown RBP12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 LY9Q9HBG7 655 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 ZSWIM6Q9HCJ5 1215 aa12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 GPHNQ9NQX3 736 aaPredicted RBP12.67□□□□□ -0.38
RN7SL546P-201ENST00000479428 USP17L15C9J2P7 530 aa12.66□□□□□ -0.38
RN7SL546P-201ENST00000479428 USP17L13C9JLJ4 530 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms