RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	USP17L12	C9JPN9	530 aa		31.53	■■■□□ 2.64
CHKB-208	ENST00000479003	USP17L21	D6R901	530 aa		31.53	■■■□□ 2.64
CHKB-208	ENST00000479003	PNOC	Q13519	176 aa		31.53	■■■□□ 2.64
CHKB-208	ENST00000479003	RILPL1	Q5EBL4	403 aa		31.53	■■■□□ 2.64
CHKB-208	ENST00000479003	METTL16	Q86W50	562 aa	Known RBP	31.53	■■■□□ 2.64
CHKB-208	ENST00000479003	SUPT20H	Q8NEM7	779 aa		31.53	■■■□□ 2.64
CHKB-208	ENST00000479003	ESR2	Q92731	530 aa		31.53	■■■□□ 2.64
CHKB-208	ENST00000479003	PIM2	Q9P1W9	311 aa		31.53	■■■□□ 2.64
CHKB-208	ENST00000479003	GPR75-ASB3	A0A0A6YYF3	556 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	PPIP5K2	O43314	1243 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	PPP2R5B	Q15173	497 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	LONRF3	Q496Y0	759 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	RTKN2	Q8IZC4	609 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	NOL10	Q9BSC4	688 aa	Known RBP	31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	SUGT1	Q9Y2Z0	365 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	GAK	O14976	1311 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	ZNF646	O15015	1829 aa	Predicted RBP	31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	PTGER2	P43116	358 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	ISM2	Q6H9L7	571 aa		31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	FAM163A	Q96GL9	167 aa	Predicted RBP	31.52	■■■□□ 2.64
CHKB-208	ENST00000479003	UTRN	P46939	3433 aa		31.51	■■■□□ 2.64
CHKB-208	ENST00000479003	DHX8	Q14562	1220 aa	Known RBP	31.51	■■■□□ 2.64
CHKB-208	ENST00000479003	HSD3B7	Q9H2F3	369 aa		31.51	■■■□□ 2.64
CHKB-208	ENST00000479003	MKRN1	Q9UHC7	482 aa	Known RBP	31.51	■■■□□ 2.64
CHKB-208	ENST00000479003	TTF2	Q9UNY4	1162 aa	Known RBP	31.51	■■■□□ 2.64
CHKB-208	ENST00000479003	BRCA1	P38398	1863 aa	Known RBP	31.51	■■■□□ 2.63
CHKB-208	ENST00000479003	TNKS	O95271	1327 aa		31.51	■■■□□ 2.63
CHKB-208	ENST00000479003	USP27X	A6NNY8	438 aa		31.51	■■■□□ 2.63
CHKB-208	ENST00000479003	NYAP1	Q6ZVC0	841 aa		31.51	■■■□□ 2.63
CHKB-208	ENST00000479003	CCDC150	Q8NCX0	1101 aa		31.51	■■■□□ 2.63
CHKB-208	ENST00000479003	CNNM3	Q8NE01	707 aa		31.51	■■■□□ 2.63
CHKB-208	ENST00000479003	NUP133	Q8WUM0	1156 aa		31.51	■■■□□ 2.63
CHKB-208	ENST00000479003	DAGLA	Q9Y4D2	1042 aa		31.51	■■■□□ 2.63
CHKB-208	ENST00000479003	LAMB1	P07942	1786 aa		31.5	■■■□□ 2.63
CHKB-208	ENST00000479003	PTPRE	P23469	700 aa		31.5	■■■□□ 2.63
CHKB-208	ENST00000479003	GRIPAP1	Q4V328	841 aa		31.5	■■■□□ 2.63
CHKB-208	ENST00000479003	SLF2	Q8IX21	1173 aa		31.5	■■■□□ 2.63
CHKB-208	ENST00000479003	PSMD1	Q99460	953 aa		31.5	■■■□□ 2.63
CHKB-208	ENST00000479003	FBXO2	Q9UK22	296 aa	Predicted RBP	31.5	■■■□□ 2.63
CHKB-208	ENST00000479003	CDK5RAP2	Q96SN8	1893 aa		31.5	■■■□□ 2.63
CHKB-208	ENST00000479003	FANCC	Q00597	558 aa		31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	TMC6	Q7Z403	805 aa		31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	CMTR1	Q8N1G2	835 aa	Known RBP	31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	RNF26	Q9BY78	433 aa	Predicted RBP	31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	ADAMTSL1	Q8N6G6	1762 aa		31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	USP5	P45974	858 aa		31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	STRIP1	Q5VSL9	837 aa		31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	CEP135	Q66GS9	1140 aa		31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	CCAR2	Q8N163	923 aa	Known RBP	31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	CCDC82	Q8N4S0	544 aa		31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	TGFBRAP1	Q8WUH2	860 aa		31.49	■■■□□ 2.63
CHKB-208	ENST00000479003	CYP2D6	P10635	497 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	LMOD1	P29536	600 aa	Predicted RBP	31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	SCNN1D	P51172	638 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	MYL5	Q02045	173 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	SLC4A8	Q2Y0W8	1093 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	DACT2	Q5SW24	774 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	MCM9	Q9NXL9	1143 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	YDJC	A8MPS7	323 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	RHBDL3	P58872	404 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	FOXP4	Q8IVH2	680 aa	Predicted RBP	31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	ANKRD7	Q92527	254 aa		31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	ZNF277	Q9NRM2	450 aa	Predicted RBP	31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	ARPP21	Q9UBL0	812 aa	Predicted RBP	31.48	■■■□□ 2.63
CHKB-208	ENST00000479003	USP17L8	P0C7I0	530 aa		31.47	■■■□□ 2.63
CHKB-208	ENST00000479003	MDM2	Q00987	491 aa	Predicted RBP	31.47	■■■□□ 2.63
CHKB-208	ENST00000479003	NR5A1	Q13285	461 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	PTPN14	Q15678	1187 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	ARMCX5	Q6P1M9	558 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	ZNF579	Q8NAF0	562 aa	Known RBP	31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	PCDHA5	Q9Y5H7	936 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	COL4A5	P29400	1685 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	NAV1	Q8NEY1	1877 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	USP17L3	A6NCW0	530 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	USP17L4	A6NCW7	530 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	MYO1B	O43795	1136 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	FGR	P09769	529 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	SYCP1	Q15431	976 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	DALRD3	Q5D0E6	543 aa	Known RBP	31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	USP17L1	Q7RTZ2	530 aa		31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	HOOK1	Q9UJC3	728 aa	Known RBP	31.46	■■■□□ 2.63
CHKB-208	ENST00000479003	CERS3	Q8IU89	383 aa		31.45	■■■□□ 2.63
CHKB-208	ENST00000479003	MAPKAPK5	Q8IW41	473 aa		31.45	■■■□□ 2.63
CHKB-208	ENST00000479003	PCDHB6	Q9Y5E3	794 aa		31.45	■■■□□ 2.63
CHKB-208	ENST00000479003	PC	P11498	1178 aa	Known RBP	31.45	■■■□□ 2.62
CHKB-208	ENST00000479003	ATP1A3	P13637	1013 aa		31.45	■■■□□ 2.62
CHKB-208	ENST00000479003	SBK1	Q52WX2	424 aa		31.45	■■■□□ 2.62
CHKB-208	ENST00000479003	KIAA0825	Q8IV33	1275 aa		31.45	■■■□□ 2.62
CHKB-208	ENST00000479003	TEX11	Q8IYF3	940 aa		31.45	■■■□□ 2.62
CHKB-208	ENST00000479003	ENAH	Q8N8S7	591 aa	Predicted RBP	31.45	■■■□□ 2.62
CHKB-208	ENST00000479003	CCDC112	Q8NEF3	446 aa		31.45	■■■□□ 2.62
CHKB-208	ENST00000479003	CEP131	Q9UPN4	1083 aa		31.45	■■■□□ 2.62
CHKB-208	ENST00000479003	PRDM1	O75626	825 aa		31.44	■■■□□ 2.62
CHKB-208	ENST00000479003	KCNJ6	P48051	423 aa		31.44	■■■□□ 2.62
CHKB-208	ENST00000479003	GRIN1	Q05586	938 aa		31.44	■■■□□ 2.62
CHKB-208	ENST00000479003	SPECC1	Q5M775	1068 aa		31.44	■■■□□ 2.62
CHKB-208	ENST00000479003	OXER1	Q8TDS5	423 aa		31.44	■■■□□ 2.62
CHKB-208	ENST00000479003	CD2AP	Q9Y5K6	639 aa		31.44	■■■□□ 2.62
CHKB-208	ENST00000479003	SRPRB	Q9Y5M8	271 aa	Known RBP	31.44	■■■□□ 2.62

Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms