RNA–Protein interactions for RNA: ENST00000478696.5

GARNL3-214, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 3

Gene GARNL3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-214ENST00000478696 ZSWIM9Q86XI8 627 aa4.09□□□□□ -1.75
GARNL3-214ENST00000478696 SLITRK4Q8IW52 837 aa4.09□□□□□ -1.75
GARNL3-214ENST00000478696 ZNF654Q8IZM8 581 aa4.09□□□□□ -1.75
GARNL3-214ENST00000478696 TMEM40Q8WWA1 233 aa4.09□□□□□ -1.75
GARNL3-214ENST00000478696 DHX38Q92620 1227 aaKnown RBP4.09□□□□□ -1.75
GARNL3-214ENST00000478696 MRRFQ96E11 262 aaKnown RBP4.09□□□□□ -1.75
GARNL3-214ENST00000478696 Q96M66 194 aa4.09□□□□□ -1.75
GARNL3-214ENST00000478696 FERD3LQ96RJ6 166 aa4.09□□□□□ -1.75
GARNL3-214ENST00000478696 FAM53CQ9NYF3 392 aa4.09□□□□□ -1.75
GARNL3-214ENST00000478696 CLEC3AO75596 197 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 PAPLNO95428 1278 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 CLCQ05315 142 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 EGR3Q06889 387 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 ZNF394Q53GI3 561 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 OVOS1Q6IE37 1185 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 TSPYL5Q86VY4 417 aaPredicted RBP4.08□□□□□ -1.76
GARNL3-214ENST00000478696 ENOX1Q8TC92 643 aaKnown RBP4.08□□□□□ -1.76
GARNL3-214ENST00000478696 EAF1Q96JC9 268 aaPredicted RBP4.08□□□□□ -1.76
GARNL3-214ENST00000478696 DHRS1Q96LJ7 313 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 CRBNQ96SW2 442 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 DUSP15Q9H1R2 295 aaPredicted RBP4.08□□□□□ -1.76
GARNL3-214ENST00000478696 CNNM2Q9H8M5 875 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 SLAMF8Q9P0V8 285 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 TMEM59LQ9UK28 342 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 CTNND2Q9UQB3 1225 aa4.08□□□□□ -1.76
GARNL3-214ENST00000478696 DNAJA2O60884 412 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 LRRN2O75325 713 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 SRFP11831 508 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 YBX3P16989 372 aaKnown RBP eCLIP4.07□□□□□ -1.76
GARNL3-214ENST00000478696 COL9A2Q14055 689 aaPredicted RBP4.07□□□□□ -1.76
GARNL3-214ENST00000478696 TMEM67Q5HYA8 995 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 LDLRAD1Q5T700 205 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 MPZL3Q6UWV2 235 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 TTC6Q86TZ1 520 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 OXR1Q8N573 874 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 ATG4CQ96DT6 458 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 KIRREL1Q96J84 757 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 SLC38A3Q99624 504 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 KRTAP4-8Q9BYQ9 185 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 MKRN2Q9H000 416 aaKnown RBP4.07□□□□□ -1.76
GARNL3-214ENST00000478696 DDX41Q9UJV9 622 aaKnown RBP4.07□□□□□ -1.76
GARNL3-214ENST00000478696 PCDHGB7Q9Y5F8 929 aa4.07□□□□□ -1.76
GARNL3-214ENST00000478696 LRRC10BA6NIK2 292 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 FARP2O94887 1054 aaPredicted RBP4.06□□□□□ -1.76
GARNL3-214ENST00000478696 RECKO95980 971 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 ESR1P03372 595 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 GLI1P08151 1106 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 NME1P15531 152 aaKnown RBP4.06□□□□□ -1.76
GARNL3-214ENST00000478696 DUSP4Q13115 394 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 NMIQ13287 307 aaPredicted RBP4.06□□□□□ -1.76
GARNL3-214ENST00000478696 PKN1Q16512 942 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 INTS3Q68E01 1043 aaKnown RBP4.06□□□□□ -1.76
GARNL3-214ENST00000478696 SPPL2CQ8IUH8 684 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 ABHD4Q8TB40 342 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 TM9SF2Q99805 663 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 GOLGA2P5Q9HBQ8 144 aa4.06□□□□□ -1.76
GARNL3-214ENST00000478696 MEIS3P2A8K0S8 358 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 TNFRSF10CO14798 259 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 UBOX5O94941 541 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 POLR2BP30876 1174 aaKnown RBP4.05□□□□□ -1.76
GARNL3-214ENST00000478696 HK2P52789 917 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 PCBP3P57721 371 aaKnown RBP4.05□□□□□ -1.76
GARNL3-214ENST00000478696 GAB4Q2WGN9 574 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 RALGPS1Q5JS13 557 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 NBPF12Q5TAG4 269 aaPredicted RBP4.05□□□□□ -1.76
GARNL3-214ENST00000478696 OGFOD2Q6N063 350 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 KSR1Q8IVT5 923 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 ZNF655Q8N720 491 aaPredicted RBP4.05□□□□□ -1.76
GARNL3-214ENST00000478696 DAGLBQ8NCG7 672 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 PDZD8Q8NEN9 1154 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 SYTL5Q8TDW5 730 aaPredicted RBP4.05□□□□□ -1.76
GARNL3-214ENST00000478696 MYLIPQ8WY64 445 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 VWCEQ96DN2 955 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 ADAMTS10Q9H324 1103 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 FBXL21Q9UKT6 434 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 ZNRF3Q9ULT6 936 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 PCDHB12Q9Y5F1 795 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 PCDHA11Q9Y5I1 949 aa4.05□□□□□ -1.76
GARNL3-214ENST00000478696 DNAJC25-GNG10A0A024R161 153 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 FITM1A5D6W6 292 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 WASH4PA8MWX3 477 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 ENDOUP21128 410 aaKnown RBP4.04□□□□□ -1.76
GARNL3-214ENST00000478696 RACK1P63244 317 aaKnown RBP4.04□□□□□ -1.76
GARNL3-214ENST00000478696 CHRNEQ04844 493 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 PAK2Q13177 524 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 MLANAQ16655 118 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 NBPF9Q3BBW0 867 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 BBS9Q3SYG4 887 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 RNF111Q6ZNA4 994 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 NT5DC4Q86YG4 428 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 CCDC144CPQ8IYA2 1237 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 LILRA2Q8N149 483 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 TAB3Q8N5C8 712 aaPredicted RBP4.04□□□□□ -1.76
GARNL3-214ENST00000478696 POU5F2Q8N7G0 328 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 RGS22Q8NE09 1264 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 CPLX3Q8WVH0 158 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 SMARCC1Q92922 1105 aaPredicted RBP4.04□□□□□ -1.76
GARNL3-214ENST00000478696 GPRASP2Q96D09 838 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 SLC6A18Q96N87 628 aa4.04□□□□□ -1.76
GARNL3-214ENST00000478696 ZMYM5Q9UJ78 669 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms