RNA–Protein interactions for RNA: ENST00000478359.5

TRAF3IP3-213, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 1 (best)

Gene TRAF3IP3, Length 1,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-213ENST00000478359 CNNM3Q8NE01 707 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 CCDC12Q8WUD4 166 aaPredicted RBP14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 MRFAP1L1Q96HT8 127 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 STX8Q9UNK0 236 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PCDHB6Q9Y5E3 794 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 C10orf71Q711Q0 1435 aa14.29□□□□□ -0.12
TRAF3IP3-213ENST00000478359 NOVP48745 357 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 ZNF75DP51815 510 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 EVX2Q03828 476 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 DHX8Q14562 1220 aaKnown RBP14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 GRIPAP1Q4V328 841 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 CC2D2BQ6DHV5 1058 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 C11orf57Q6ZUT1 292 aaPredicted RBP14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 OXER1Q8TDS5 423 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TNFRSF25Q93038 417 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 CNKSR1Q969H4 720 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TEKT1Q969V4 418 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SPZ1Q9BXG8 430 aa14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SAP30BPQ9UHR5 308 aaKnown RBP14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.28□□□□□ -0.12
TRAF3IP3-213ENST00000478359 SNED1Q8TER0 1413 aa14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 PALM3A6NDB9 673 aaPredicted RBP14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 IKBKBO14920 756 aa14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 AP5Z1O43299 807 aa14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 MYO1BO43795 1136 aa14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TOP1P11387 765 aaKnown RBP14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 HDLBPQ00341 1268 aaKnown RBP14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TMEM47Q9BQJ4 181 aa14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 MAD2L2Q9UI95 211 aa14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 TTF2Q9UNY4 1162 aaKnown RBP14.27□□□□□ -0.12
TRAF3IP3-213ENST00000478359 hCG_1984214I3L0E3 225 aa14.27□□□□□ -0.13
TRAF3IP3-213ENST00000478359 C2CD5Q86YS7 1000 aa14.27□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ZNF713Q8N859 430 aaPredicted RBP14.27□□□□□ -0.13
TRAF3IP3-213ENST00000478359 DAGLBQ8NCG7 672 aa14.27□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CLIC6Q96NY7 704 aa14.27□□□□□ -0.13
TRAF3IP3-213ENST00000478359 PCDHA4Q9UN74 947 aa14.27□□□□□ -0.13
TRAF3IP3-213ENST00000478359 USP17L3A6NCW0 530 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 USP17L4A6NCW7 530 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 HLA-DOAP06340 250 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 NPY5RQ15761 445 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SLC4A8Q2Y0W8 1093 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 TTC38Q5R3I4 469 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 USP17L1Q7RTZ2 530 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 DHX40Q8IX18 779 aaKnown RBP14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 DRC7Q8IY82 874 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 BLIDQ8IZY5 108 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 TRIML1Q8N9V2 468 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 FBXW7Q969H0 707 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ZNF622Q969S3 477 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 DACH1Q9UI36 760 aa14.26□□□□□ -0.13
TRAF3IP3-213ENST00000478359 OFD1O75665 1012 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 PARP1P09874 1014 aaKnown RBP14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SLC15A2Q16348 729 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 STRIP1Q5VSL9 837 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ARL6IP4Q66PJ3 421 aaKnown RBP14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SUPT20HQ8NEM7 779 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 PIBF1Q8WXW3 757 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 NEMFO60524 1076 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ATP2C1P98194 919 aaPredicted RBP14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 GABPAQ06546 454 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CT47A1Q5JQC4 288 aaPredicted RBP14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SLC44A5Q8NCS7 719 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SHISA4Q96DD7 197 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 BARHL2Q9NY43 387 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 STK32BQ9NY57 414 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SERPINB13Q9UIV8 391 aa14.25□□□□□ -0.13
TRAF3IP3-213ENST00000478359 MYH8P13535 1937 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 hCG_1642624A0A1W2PR95 340 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 KLRF2D3W0D1 207 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 DPCR1Q3MIW9 517 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 LONRF3Q496Y0 759 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 NT5DC1Q5TFE4 455 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CERS5Q8N5B7 392 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 AOPEPQ8N6M6 819 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 EHD4Q9H223 541 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 DHX36Q9H2U1 1008 aaKnown RBP14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 USP40Q9NVE5 1235 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CLIP2Q9UDT6 1046 aa14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SEC63Q9UGP8 760 aaKnown RBP14.24□□□□□ -0.13
TRAF3IP3-213ENST00000478359 LAD1O00515 517 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 POLR2DO15514 142 aaKnown RBP14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ATP2B1P20020 1258 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 GNA11P29992 359 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 TERF1P54274 439 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 POSTNQ15063 836 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 METTL16Q86W50 562 aaKnown RBP14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 STAG2Q8N3U4 1231 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 RRP36Q96EU6 259 aaKnown RBP14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CCDC17Q96LX7 622 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ZDHHC15Q96MV8 337 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 OSBPL5Q9H0X9 879 aaPredicted RBP14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CSRNP2Q9H175 543 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 CCDC194A0A1B0GVG4 234 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 SMC2O95347 1197 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 MDM2Q00987 491 aaPredicted RBP14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 DOK7Q18PE1 504 aa14.23□□□□□ -0.13
TRAF3IP3-213ENST00000478359 ASPRV1Q53RT3 343 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms