RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 SNX14Q9Y5W7 946 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 WDR33Q9C0J8 1336 aaKnown RBP5.91□□□□□ -1.46
SF3B6-202ENST00000478050 PAPPAQ13219 1627 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 COL15A1P39059 1388 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 TNS3Q68CZ2 1445 aa5.91□□□□□ -1.46
SF3B6-202ENST00000478050 LAMA4Q16363 1823 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 MYH15Q9Y2K3 1946 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 PRPF40AO75400 957 aaKnown RBP5.9□□□□□ -1.46
SF3B6-202ENST00000478050 NCLP19338 710 aaKnown RBP5.9□□□□□ -1.46
SF3B6-202ENST00000478050 NASPP49321 788 aaPredicted RBP5.9□□□□□ -1.46
SF3B6-202ENST00000478050 KCNQ4P56696 695 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 KCNA1Q09470 495 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 NEXNQ0ZGT2 675 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 G3BP1Q13283 466 aaKnown RBP eCLIP5.9□□□□□ -1.46
SF3B6-202ENST00000478050 PKP1Q13835 747 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 PROSER3Q2NL68 480 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 EML3Q32P44 896 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 ZSCAN23Q3MJ62 389 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 CAVIN1Q6NZI2 390 aaKnown RBP5.9□□□□□ -1.46
SF3B6-202ENST00000478050 IFNL2Q8IZJ0 200 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 KCNB2Q92953 911 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 SYAP1Q96A49 352 aaPredicted RBP5.9□□□□□ -1.46
SF3B6-202ENST00000478050 EVI5LQ96CN4 794 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 ABHD8Q96I13 439 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 TTC14Q96N46 770 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 UCN2Q96RP3 112 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 TM6SF1Q9BZW5 370 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 SLC52A2Q9HAB3 445 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 PRDM10Q9NQV6 1147 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 ZNF358Q9NW07 568 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 NOD1Q9Y239 953 aa5.9□□□□□ -1.46
SF3B6-202ENST00000478050 PLCH1Q4KWH8 1693 aa5.9□□□□□ -1.47
SF3B6-202ENST00000478050 TJP1Q07157 1748 aa5.9□□□□□ -1.47
SF3B6-202ENST00000478050 ABCA3Q99758 1704 aa5.9□□□□□ -1.47
SF3B6-202ENST00000478050 SPEF2Q9C093 1822 aa5.9□□□□□ -1.47
SF3B6-202ENST00000478050 MEGF6O75095 1541 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 CCDC85CA6NKD9 419 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 PLSCR1O15162 318 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 MAP4K4O95819 1239 aaPredicted RBP5.89□□□□□ -1.47
SF3B6-202ENST00000478050 PHKG2P15735 406 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 SSTR4P31391 388 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 RGS19P49795 217 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 AFF1P51825 1210 aaKnown RBP5.89□□□□□ -1.47
SF3B6-202ENST00000478050 GTF2IP78347 998 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 FSTL1Q12841 308 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 CWF19L2Q2TBE0 894 aaKnown RBP5.89□□□□□ -1.47
SF3B6-202ENST00000478050 ZNF790Q6PG37 636 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 LRSAM1Q6UWE0 723 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 AACSQ86V21 672 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 GPT2Q8TD30 523 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 C7orf43Q8WVR3 580 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 SUCLG2Q96I99 432 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 HSH2DQ96JZ2 352 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 ZSCAN31Q96LW9 406 aaPredicted RBP5.89□□□□□ -1.47
SF3B6-202ENST00000478050 METTL22Q9BUU2 404 aaPredicted RBP5.89□□□□□ -1.47
SF3B6-202ENST00000478050 UPF3BQ9BZI7 483 aaKnown RBP5.89□□□□□ -1.47
SF3B6-202ENST00000478050 IL25Q9H293 177 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 BTG4Q9NY30 223 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 LIMCH1Q9UPQ0 1083 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.89□□□□□ -1.47
SF3B6-202ENST00000478050 SPATA31A5Q5VU36 1347 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 SPATA31A7Q8IWB4 1347 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 CPDO75976 1380 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 MYH7P12883 1935 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 RFX7Q2KHR2 1363 aa5.89□□□□□ -1.47
SF3B6-202ENST00000478050 IGKV5-2P06315 115 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 SNRPA1P09661 255 aaKnown RBP5.88□□□□□ -1.47
SF3B6-202ENST00000478050 SOX11P35716 441 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 AK2P54819 239 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 ZC3H6P61129 1189 aaKnown RBP5.88□□□□□ -1.47
SF3B6-202ENST00000478050 SLC15A2Q16348 729 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 HS1BP3Q53T59 392 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 VPS53Q5VIR6 699 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 C1orf53Q5VUE5 145 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 CWC27Q6UX04 472 aaKnown RBP5.88□□□□□ -1.47
SF3B6-202ENST00000478050 NOL8Q76FK4 1167 aaKnown RBP5.88□□□□□ -1.47
SF3B6-202ENST00000478050 SLC51AQ86UW1 340 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 TTC5Q8N0Z6 440 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 TMEM87AQ8NBN3 555 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 KAZALD1Q96I82 304 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 PNMA5Q96PV4 448 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 FMNL2Q96PY5 1086 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 BICC1Q9H694 974 aaKnown RBP5.88□□□□□ -1.47
SF3B6-202ENST00000478050 SH2B1Q9NRF2 756 aaPredicted RBP5.88□□□□□ -1.47
SF3B6-202ENST00000478050 NLRP2Q9NX02 1062 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 PA2G4Q9UQ80 394 aaKnown RBP5.88□□□□□ -1.47
SF3B6-202ENST00000478050 SMC3Q9UQE7 1217 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 HCN4Q9Y3Q4 1203 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 ATP6V1DQ9Y5K8 247 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 SPATA31A3Q5VYP0 1347 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 CCDC171Q6TFL3 1326 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 RPAP1Q9BWH6 1393 aaPredicted RBP5.88□□□□□ -1.47
SF3B6-202ENST00000478050 THSD7AQ9UPZ6 1657 aa5.88□□□□□ -1.47
SF3B6-202ENST00000478050 ARID1BQ8NFD5 2236 aaPredicted RBP5.87□□□□□ -1.47
SF3B6-202ENST00000478050 PRAMEF22A3QJZ6 481 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 SASH1O94885 1247 aa5.87□□□□□ -1.47
SF3B6-202ENST00000478050 ZSCAN22P10073 491 aaPredicted RBP5.87□□□□□ -1.47
SF3B6-202ENST00000478050 ZKSCAN1P17029 563 aaPredicted RBP5.87□□□□□ -1.47
SF3B6-202ENST00000478050 CASTP20810 708 aaKnown RBP5.87□□□□□ -1.47
SF3B6-202ENST00000478050 PSMA5P28066 241 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms