RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 RGMBQ6NW40 437 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 KCNB2Q92953 911 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 SLC10A4Q96EP9 437 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 CCDC17Q96LX7 622 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 KCNK17Q96T54 332 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 BACH2Q9BYV9 841 aa13.55□□□□□ -0.24
CBWD3-206ENST00000478048 RNF41Q9H4P4 317 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-206ENST00000478048 GREB1LQ9C091 1923 aaPredicted RBP13.55□□□□□ -0.24
CBWD3-206ENST00000478048 UNCXA6NJT0 531 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 TSPY2A6NKD2 308 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 KDM4AO75164 1064 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 ASNSP08243 561 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 ZNF157P51786 506 aaPredicted RBP13.54□□□□□ -0.24
CBWD3-206ENST00000478048 RNF20Q5VTR2 975 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 OPTNQ96CV9 577 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 CABP5Q9NP86 173 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 PICK1Q9NRD5 415 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 SNX14Q9Y5W7 946 aa13.54□□□□□ -0.24
CBWD3-206ENST00000478048 SPDYE5A6NIY4 337 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 NMT2O60551 498 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 TSPY3P0CV98 308 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 TSPY8P0CW00 308 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 PCP11498 1178 aaKnown RBP13.53□□□□□ -0.24
CBWD3-206ENST00000478048 TSGA10IPQ3SY00 556 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 CYP4F22Q6NT55 531 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 TMEM179Q6ZVK1 233 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 ZNF454Q8N9F8 522 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 NEDD1Q8NHV4 660 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 ZSWIM5Q9P217 1185 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 ZHX2Q9Y6X8 837 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 IGKV6D-41A0A0C4DH26 115 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 RASSF10A6NK89 507 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 ZKSCAN1P17029 563 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-206ENST00000478048 GRM1Q13255 1194 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 DEFB115Q30KQ5 88 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
CBWD3-206ENST00000478048 CYB5R4Q7L1T6 521 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 ERO1BQ86YB8 467 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 SIAH1Q8IUQ4 282 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 ESR2Q92731 530 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 HHIPL1Q96JK4 782 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
CBWD3-206ENST00000478048 USP17L5A8MUK1 530 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 FAM155AB1AL88 458 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-206ENST00000478048 IRF6O14896 467 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 SLC10A3P09131 477 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 TRDNQ13061 729 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 CHST3Q7LGC8 479 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 MB21D2Q8IYB1 491 aaPredicted RBP13.52□□□□□ -0.25
CBWD3-206ENST00000478048 NCOA7Q8NI08 942 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 ACER1Q8TDN7 264 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 CEP95Q96GE4 821 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 WNK4Q96J92 1243 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 KRT23Q9C075 422 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 CNNM2Q9H8M5 875 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 GINM1Q9NU53 330 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 AFG3L2Q9Y4W6 797 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 PLIN4Q96Q06 1357 aa13.52□□□□□ -0.25
CBWD3-206ENST00000478048 A0A1W2PRG0 241 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 EIF5BO60841 1220 aaKnown RBP13.51□□□□□ -0.25
CBWD3-206ENST00000478048 CPA1P15085 419 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 MCCP23508 829 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 ECE1P42892 770 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 ANTXR2P58335 489 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 PPATQ06203 517 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 SPP2Q13103 211 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 SPRYD7Q5W111 196 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 RALYLQ86SE5 291 aaKnown RBP13.51□□□□□ -0.25
CBWD3-206ENST00000478048 PTPRFP10586 1907 aa13.51□□□□□ -0.25
CBWD3-206ENST00000478048 TRIM75PA6NK02 468 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 EEF2P13639 858 aaKnown RBP13.5□□□□□ -0.25
CBWD3-206ENST00000478048 ATP2B2Q01814 1243 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 ICA1Q05084 483 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 DGKZQ13574 1117 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 ZNF280CQ8ND82 737 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 NEK1Q96PY6 1258 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 ZIC5Q96T25 663 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 KANSL2Q9H9L4 492 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 MTMR4Q9NYA4 1195 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 MYH4Q9Y623 1939 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 PPIL2Q13356 520 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 DDX27Q96GQ7 796 aaKnown RBP13.5□□□□□ -0.25
CBWD3-206ENST00000478048 CAPNS2Q96L46 248 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 TCEANC2Q96MN5 208 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 JAKMIP1Q96N16 626 aaKnown RBP13.5□□□□□ -0.25
CBWD3-206ENST00000478048 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
CBWD3-206ENST00000478048 WDR18Q9BV38 432 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 C22orf23Q9BZE7 217 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 CLIP2Q9UDT6 1046 aa13.5□□□□□ -0.25
CBWD3-206ENST00000478048 ZBTB48P10074 688 aaPredicted RBP13.49□□□□□ -0.25
CBWD3-206ENST00000478048 VEGFBP49765 207 aa13.49□□□□□ -0.25
CBWD3-206ENST00000478048 KRT32Q14532 448 aa13.49□□□□□ -0.25
CBWD3-206ENST00000478048 ZYXQ15942 572 aaKnown RBP13.49□□□□□ -0.25
CBWD3-206ENST00000478048 RCSD1Q6JBY9 416 aa13.49□□□□□ -0.25
CBWD3-206ENST00000478048 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
CBWD3-206ENST00000478048 LRRC2Q9BYS8 371 aa13.49□□□□□ -0.25
CBWD3-206ENST00000478048 AS3MTQ9HBK9 375 aa13.49□□□□□ -0.25
CBWD3-206ENST00000478048 TCP11L1Q9NUJ3 509 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms