RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 VTI1BQ9UEU0 232 aa7.65□□□□□ -1.18
LMBR1-216ENST00000477983 ROBO2Q9HCK4 1378 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 ZGLP1P0C6A0 271 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 CFPP27918 469 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 EGR3Q06889 387 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 FAM196AQ6ZSG2 479 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 ERMP1Q7Z2K6 904 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 C1QL4Q86Z23 238 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 GOLM1Q8NBJ4 401 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 DIRC2Q96SL1 478 aa7.64□□□□□ -1.19
LMBR1-216ENST00000477983 MINDY4BA8MYZ0 360 aa7.63□□□□□ -1.19
LMBR1-216ENST00000477983 DNAJA2O60884 412 aa7.63□□□□□ -1.19
LMBR1-216ENST00000477983 C1QTNF9P0C862 333 aa7.63□□□□□ -1.19
LMBR1-216ENST00000477983 FAM160A1Q05DH4 1040 aa7.63□□□□□ -1.19
LMBR1-216ENST00000477983 NR0B2Q15466 257 aa7.63□□□□□ -1.19
LMBR1-216ENST00000477983 ANKLE2Q86XL3 938 aa7.63□□□□□ -1.19
LMBR1-216ENST00000477983 LILRA2Q8N149 483 aa7.63□□□□□ -1.19
LMBR1-216ENST00000477983 ZNF281Q9Y2X9 895 aa7.63□□□□□ -1.19
LMBR1-216ENST00000477983 GRIN3BO60391 1043 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 GREM1O60565 184 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 TNNI2P48788 182 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 CCDC27Q2M243 656 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 SNAP47Q5SQN1 464 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 DHX38Q92620 1227 aaKnown RBP7.62□□□□□ -1.19
LMBR1-216ENST00000477983 LRRC3Q9BY71 257 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 GZF1Q9H116 711 aaPredicted RBP7.62□□□□□ -1.19
LMBR1-216ENST00000477983 EPB41L4BQ9H329 900 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 KLHL3Q9UH77 587 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 PCDHA11Q9Y5I1 949 aa7.62□□□□□ -1.19
LMBR1-216ENST00000477983 NFIBO00712 420 aa7.61□□□□□ -1.19
LMBR1-216ENST00000477983 RGS13O14921 159 aa7.61□□□□□ -1.19
LMBR1-216ENST00000477983 MED14OSP0DP75 135 aa7.61□□□□□ -1.19
LMBR1-216ENST00000477983 FBXL19Q6PCT2 694 aa7.61□□□□□ -1.19
LMBR1-216ENST00000477983 SIAH1Q8IUQ4 282 aa7.61□□□□□ -1.19
LMBR1-216ENST00000477983 OXR1Q8N573 874 aa7.61□□□□□ -1.19
LMBR1-216ENST00000477983 ZSCAN18Q8TBC5 510 aaPredicted RBP7.61□□□□□ -1.19
LMBR1-216ENST00000477983 ENOX1Q8TC92 643 aaKnown RBP7.61□□□□□ -1.19
LMBR1-216ENST00000477983 KIF2CQ99661 725 aa7.61□□□□□ -1.19
LMBR1-216ENST00000477983 DCP1AQ9NPI6 582 aaPredicted RBP7.61□□□□□ -1.19
LMBR1-216ENST00000477983 ZCCHC6Q5VYS8 1495 aaKnown RBP7.61□□□□□ -1.19
LMBR1-216ENST00000477983 SHISA3A0PJX4 238 aa7.6□□□□□ -1.19
LMBR1-216ENST00000477983 FITM1A5D6W6 292 aa7.6□□□□□ -1.19
LMBR1-216ENST00000477983 SLC22A31A6NKX4 558 aa7.6□□□□□ -1.19
LMBR1-216ENST00000477983 ATE1O95260 518 aa7.6□□□□□ -1.19
LMBR1-216ENST00000477983 TRHRP34981 398 aaPredicted RBP7.6□□□□□ -1.19
LMBR1-216ENST00000477983 PHACTR4Q8IZ21 702 aa7.6□□□□□ -1.19
LMBR1-216ENST00000477983 KBTBD4Q9NVX7 518 aa7.6□□□□□ -1.19
LMBR1-216ENST00000477983 TMEM253P0C7T8 217 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 GLDCP23378 1020 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 LTKP29376 864 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 EIF4A3P38919 411 aaKnown RBP7.59□□□□□ -1.19
LMBR1-216ENST00000477983 TEKQ02763 1124 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 SPPL2CQ8IUH8 684 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 SLC26A8Q96RN1 970 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 RNF32Q9H0A6 362 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 C19orf44Q9H6X5 657 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 KCNK12Q9HB15 430 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 COPRSQ9NQ92 184 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 EBF1Q9UH73 591 aa7.59□□□□□ -1.19
LMBR1-216ENST00000477983 GBP1P32455 592 aa7.58□□□□□ -1.2
LMBR1-216ENST00000477983 MLECQ14165 292 aa7.58□□□□□ -1.2
LMBR1-216ENST00000477983 SNX17Q15036 470 aa7.58□□□□□ -1.2
LMBR1-216ENST00000477983 CWF19L2Q2TBE0 894 aaKnown RBP7.58□□□□□ -1.2
LMBR1-216ENST00000477983 IRF2BP1Q8IU81 584 aa7.58□□□□□ -1.2
LMBR1-216ENST00000477983 LRRC56Q8IYG6 542 aaPredicted RBP7.58□□□□□ -1.2
LMBR1-216ENST00000477983 LINC01599Q8WXQ3 324 aa7.58□□□□□ -1.2
LMBR1-216ENST00000477983 CWC22Q9HCG8 908 aaKnown RBP7.58□□□□□ -1.2
LMBR1-216ENST00000477983 CD320Q9NPF0 282 aa7.58□□□□□ -1.2
LMBR1-216ENST00000477983 SUPT16HQ9Y5B9 1047 aaKnown RBP7.58□□□□□ -1.2
LMBR1-216ENST00000477983 UBOX5O94941 541 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 CHRNEQ04844 493 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 TIGD5Q53EQ6 642 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 CDCP2Q5VXM1 449 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 LCNL1Q6ZST4 164 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 AMIGO3Q86WK7 504 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 USHBP1Q8N6Y0 703 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 SYTL5Q8TDW5 730 aaPredicted RBP7.57□□□□□ -1.2
LMBR1-216ENST00000477983 SYTL4Q96C24 671 aaPredicted RBP7.57□□□□□ -1.2
LMBR1-216ENST00000477983 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.57□□□□□ -1.2
LMBR1-216ENST00000477983 EHMT1Q9H9B1 1298 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 BRMS1Q9HCU9 246 aa7.57□□□□□ -1.2
LMBR1-216ENST00000477983 ETV2O00321 342 aaPredicted RBP7.56□□□□□ -1.2
LMBR1-216ENST00000477983 TLR3O15455 904 aaKnown RBP7.56□□□□□ -1.2
LMBR1-216ENST00000477983 DUSP4Q13115 394 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 MRPL58Q14197 206 aaKnown RBP7.56□□□□□ -1.2
LMBR1-216ENST00000477983 CLEC16AQ2KHT3 1053 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 ARSHQ5FYA8 562 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 ATG14Q6ZNE5 492 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 ANKS4BQ8N8V4 417 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 DAGLBQ8NCG7 672 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 KCNN1Q92952 543 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 G6PC3Q9BUM1 346 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 HDAC8Q9BY41 377 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 SLC6A17Q9H1V8 727 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 GMIPQ9P107 970 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 YBX2Q9Y2T7 364 aaKnown RBP7.56□□□□□ -1.2
LMBR1-216ENST00000477983 PCDHB14Q9Y5E9 798 aa7.56□□□□□ -1.2
LMBR1-216ENST00000477983 RNF4P78317 190 aa7.55□□□□□ -1.2
LMBR1-216ENST00000477983 NMIQ13287 307 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms