RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 U2AF1L4Q8WU68 220 aaKnown RBP7.98□□□□□ -1.13
LINC00173-202ENST00000477702 ZBED3Q96IU2 234 aaPredicted RBP7.98□□□□□ -1.13
LINC00173-202ENST00000477702 GDF15Q99988 308 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 PCDHAC2Q9Y5I4 1007 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 PRUNE2Q8WUY3 3088 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 RPTORQ8N122 1335 aa7.98□□□□□ -1.13
LINC00173-202ENST00000477702 CTGFP29279 349 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 GRK4P32298 578 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 GPC1P35052 558 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 SUPT20HL1Q3ZLR7 823 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 C4orf17Q53FE4 359 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 ANKRD13AQ8IZ07 590 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 C7orf61Q8IZ16 206 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 RAET1EQ8TD07 263 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 TRIM47Q96LD4 638 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 FAM161BQ96MY7 647 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 VEZTQ9HBM0 779 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 RIPOR2Q9Y4F9 1068 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 XDHP47989 1333 aa7.97□□□□□ -1.13
LINC00173-202ENST00000477702 LAMA2P24043 3122 aaKnown RBP7.96□□□□□ -1.13
LINC00173-202ENST00000477702 PDIA4P13667 645 aaKnown RBP7.96□□□□□ -1.14
LINC00173-202ENST00000477702 SYN1P17600 705 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 PSMC4P43686 418 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 FKBP5Q13451 457 aaPredicted RBP7.96□□□□□ -1.14
LINC00173-202ENST00000477702 DLGAP5Q15398 846 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 LRIT3Q3SXY7 679 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 STRIP1Q5VSL9 837 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 LYSMD3Q7Z3D4 306 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 JARID2Q92833 1246 aaPredicted RBP7.96□□□□□ -1.14
LINC00173-202ENST00000477702 CFAP53Q96M91 514 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 GUCD1Q96NT3 240 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 MKNK1Q9BUB5 465 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 TRAIPQ9BWF2 469 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 CXXC1Q9P0U4 656 aaPredicted RBP7.96□□□□□ -1.14
LINC00173-202ENST00000477702 SRRDQ9UH36 339 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 NUDCQ9Y266 331 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 AOX1Q06278 1338 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 MYO3BQ8WXR4 1341 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 IRS2Q9Y4H2 1338 aa7.96□□□□□ -1.14
LINC00173-202ENST00000477702 ZNF646O15015 1829 aaPredicted RBP7.96□□□□□ -1.14
LINC00173-202ENST00000477702 COL1A1P02452 1464 aaPredicted RBP7.95□□□□□ -1.14
LINC00173-202ENST00000477702 EYSQ5T1H1 3165 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 UNCXA6NJT0 531 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 TLR2O60603 784 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 WDHD1O75717 1129 aaPredicted RBP7.95□□□□□ -1.14
LINC00173-202ENST00000477702 TFRCP02786 760 aaKnown RBP7.95□□□□□ -1.14
LINC00173-202ENST00000477702 BMP8BP34820 402 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 MAGEA10P43363 369 aaPredicted RBP7.95□□□□□ -1.14
LINC00173-202ENST00000477702 PLA2G4AP47712 749 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 GTF2A2P52657 109 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 PRMT2P55345 433 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 TTLL5Q6EMB2 1281 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 TXNRD3Q86VQ6 643 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 PAWRQ96IZ0 340 aaKnown RBP7.95□□□□□ -1.14
LINC00173-202ENST00000477702 ISCA1Q9BUE6 129 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 CPA4Q9UI42 421 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 TSPYL4Q9UJ04 414 aa7.95□□□□□ -1.14
LINC00173-202ENST00000477702 LAMB1P07942 1786 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 F8W031 263 aaPredicted RBP7.94□□□□□ -1.14
LINC00173-202ENST00000477702 MAN1A2O60476 641 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 SGPL1O95470 568 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 IGFBP4P22692 258 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 KLRK1P26718 216 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 UBXN2AP68543 259 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 VGLL4Q14135 290 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 RASA3Q14644 834 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.94□□□□□ -1.14
LINC00173-202ENST00000477702 ANKRD18AQ8IVF6 992 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 TDHQ8IZJ6 230 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 RHBDD1Q8TEB9 315 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 DIS3LQ8TF46 1054 aaKnown RBP7.94□□□□□ -1.14
LINC00173-202ENST00000477702 DEFB118Q96PH6 123 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 PPP2R3BQ9Y5P8 575 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 ZNF804BA4D1E1 1349 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 MYPNQ86TC9 1320 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 MED23Q9ULK4 1368 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 BDP1A6H8Y1 2624 aa7.94□□□□□ -1.14
LINC00173-202ENST00000477702 SPATA31C2B4DYI2 1134 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 BTBD19C9JJ37 291 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 PLA2G5P39877 138 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 TXLNAP40222 546 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 PRKCZQ05513 592 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 CCDC152Q4G0S7 254 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 GNASQ5JWF2 1037 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 CERS5Q8N5B7 392 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 PLBD2Q8NHP8 589 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 PRMT6Q96LA8 375 aaPredicted RBP7.93□□□□□ -1.14
LINC00173-202ENST00000477702 C2orf49Q9BVC5 232 aaPredicted RBP7.93□□□□□ -1.14
LINC00173-202ENST00000477702 NIFKQ9BYG3 293 aaKnown RBP7.93□□□□□ -1.14
LINC00173-202ENST00000477702 UBE2OQ9C0C9 1292 aaKnown RBP7.93□□□□□ -1.14
LINC00173-202ENST00000477702 COA1Q9GZY4 146 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 CHPF2Q9P2E5 772 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 HCN4Q9Y3Q4 1203 aa7.93□□□□□ -1.14
LINC00173-202ENST00000477702 ALPK3Q96L96 1907 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 OTOFQ9HC10 1997 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 EML1O00423 815 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 MYO1BO43795 1136 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 CETPP11597 493 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 ELNP15502 786 aa7.92□□□□□ -1.14
LINC00173-202ENST00000477702 HOXD10P28358 340 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms