RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 IRS4O14654 1257 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 ZEB2O60315 1214 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 CCDC181Q5TID7 509 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 APLFQ8IW19 511 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 CKAP2LQ8IYA6 745 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 ZNF34Q8IZ26 560 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 ZNF594Q96JF6 807 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 CCDC114Q96M63 670 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 HAUS7Q99871 368 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 ANKZF1Q9H8Y5 726 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 SLC39A2Q9NP94 309 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 PALD1Q9ULE6 856 aa14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.23□□□□□ -0.13
RTFDC1-207ENST00000477573 PDE8AO60658 829 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 CTSWP56202 376 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 CHMP4BP1P59074 171 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 CAMK4Q16566 473 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 LRRC24Q50LG9 513 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 SRGAP1Q7Z6B7 1085 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 FAM76AQ8TAV0 307 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 ABCB6Q9NP58 842 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 ZNF831Q5JPB2 1677 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 RREB1Q92766 1687 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 FANCGO15287 622 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 PHACTR2O75167 634 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 DNM1Q05193 864 aaKnown RBP14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 CCDC38Q502W7 563 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 PARP10Q53GL7 1025 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 MEX3CQ5U5Q3 659 aaKnown RBP14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 MMADHCQ9H3L0 296 aaPredicted RBP14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 ACTR5Q9H9F9 607 aaPredicted RBP14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 SLC40A1Q9NP59 571 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 SNRKQ9NRH2 765 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 ZNF652Q9Y2D9 606 aa14.22□□□□□ -0.13
RTFDC1-207ENST00000477573 MYH3P11055 1940 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 BECN2A8MW95 431 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 KCNQ2O43526 872 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 SYF2O95926 243 aaKnown RBP14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 KRT85P78386 507 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 NMIQ13287 307 aaPredicted RBP14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 ITPK1Q13572 414 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 MFSD4BQ5TF39 518 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 TAX1BP1Q86VP1 789 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 TTLL11Q8NHH1 800 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 RBM41Q96IZ5 413 aaKnown RBP14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 SPAG5Q96R06 1193 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 YIPF2Q9BWQ6 316 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 PAPOLBQ9NRJ5 636 aaKnown RBP14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 DACT1Q9NYF0 836 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 ZNF609O15014 1411 aa14.21□□□□□ -0.13
RTFDC1-207ENST00000477573 STX1AQ16623 288 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 ARMCX5Q6P1M9 558 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 BZW1Q7L1Q6 419 aaKnown RBP14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 KAT14Q9H8E8 782 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 TRPC6Q9Y210 931 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 ZKSCAN1P17029 563 aaPredicted RBP14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 ITGA6P23229 1130 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 TIMM10P62072 90 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 ZBED6P86452 979 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 IGSF22Q8N9C0 903 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 CAPS2Q9BXY5 557 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 G3BP2Q9UN86 482 aaKnown RBP14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 SNX14Q9Y5W7 946 aa14.2□□□□□ -0.14
RTFDC1-207ENST00000477573 SH3TC1Q8TE82 1336 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 RNF8O76064 485 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 CYB5D1Q6P9G0 228 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 LDHAL6AQ6ZMR3 332 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 GALNT15Q8N3T1 639 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 FAM227BQ96M60 508 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 GORASP1Q9BQQ3 440 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 PUS3Q9BZE2 481 aaKnown RBP14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 UBN2Q6ZU65 1347 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 CAMTA2O94983 1202 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 CCDC13Q8IYE1 715 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 KBTBD3Q8NAB2 608 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 LEO1Q8WVC0 666 aaPredicted RBP14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 CCDC85AQ96PX6 553 aaPredicted RBP14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 TRIM4Q9C037 500 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 SCAND2PQ9GZW5 306 aaPredicted RBP14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 EBF2Q9HAK2 575 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 INCENPQ9NQS7 918 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 CNNM1Q9NRU3 951 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 TPCN1Q9ULQ1 816 aa14.19□□□□□ -0.14
RTFDC1-207ENST00000477573 GRIN2DO15399 1336 aa14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 IFIT1P09914 478 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 USP4Q13107 963 aa14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 PRPF40BQ6NWY9 871 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 MAP4K1Q92918 833 aa14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 RMDN2Q96LZ7 410 aa14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 ARPC5LQ9BPX5 153 aa14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 GREM2Q9H772 168 aa14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 PAG1Q9NWQ8 432 aa14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 RTEL1Q9NZ71 1219 aa14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 COL5A3P25940 1745 aaPredicted RBP14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 MYH14Q7Z406 1995 aaKnown RBP14.18□□□□□ -0.14
RTFDC1-207ENST00000477573 A0A0D9SFI3 127 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 MCM3P25205 808 aa14.17□□□□□ -0.14
RTFDC1-207ENST00000477573 PTH1RQ03431 593 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms