RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 PFKFB3Q16875 520 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 CCDC178Q5BJE1 867 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 NOM1Q5C9Z4 860 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 USP17L1Q7RTZ2 530 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 CERS3Q8IU89 383 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 ELOA2Q8IYF1 753 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 TEX11Q8IYF3 940 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 ZNF444Q8N0Y2 327 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 PNMA1Q8ND90 353 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 ANKS1AQ92625 1134 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 CSRNP2Q9H175 543 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 SERTAD1Q9UHV2 236 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 HOOK1Q9UJC3 728 aaKnown RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 PCDHA5Q9Y5H7 936 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 GPR75-ASB3A0A0A6YYF3 556 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 SMC2O95347 1197 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 MDM2Q00987 491 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 MFSD14BQ5SR56 506 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 OLFM4Q6UX06 510 aa12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 FOXP4Q8IVH2 680 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 MORC2Q9Y6X9 1032 aaPredicted RBP12.62□□□□□ -0.39
HLA-DMB-260ENST00000477537 UQCRHLA0A096LP55 91 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 KLRG2A4D1S0 409 aaPredicted RBP12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 LRRC37AA6NMS7 1700 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 PPEF1O14829 653 aaPredicted RBP12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 IKBKBO14920 756 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 BMP15O95972 392 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 UQCRHP07919 91 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 GRM4Q14833 912 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 R3HDM1Q15032 1099 aaKnown RBP12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 POSTNQ15063 836 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 ZNF174Q15697 407 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 TTC38Q5R3I4 469 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 USP49Q70CQ1 688 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 PDILTQ8N807 584 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 TCP11L1Q9NUJ3 509 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 IFNKQ9P0W0 207 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 ANKRD31Q8N7Z5 1873 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 QSER1Q2KHR3 1735 aa12.61□□□□□ -0.39
HLA-DMB-260ENST00000477537 WNT7AO00755 349 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 PRR29P0C7W0 189 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 VEGFAP15692 232 aaPredicted RBP12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 PLCG2P16885 1265 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 RASA1P20936 1047 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 ARID5BQ14865 1188 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 FILIP1Q7Z7B0 1213 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 LRRC8AQ8IWT6 810 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 STAG2Q8N3U4 1231 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 TBC1D22AQ8WUA7 517 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 MYH1P12882 1939 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 LTBP1Q14766 1721 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 RIMBP2O15034 1052 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 ACTN4O43707 911 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 NEMFO60524 1076 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 LMOD1P29536 600 aaPredicted RBP12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 CDK8P49336 464 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 MYL5Q02045 173 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 PIK3AP1Q6ZUJ8 805 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 TMC4Q7Z404 712 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 SP8Q8IXZ3 490 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 GRAMD1CQ8IYS0 662 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 FERMT2Q96AC1 680 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 ZNF287Q9HBT7 754 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 MAD2L2Q9UI95 211 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 MAN1B1Q9UKM7 699 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 MTMR7Q9Y216 660 aa12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 DDX60LQ5H9U9 1706 aaKnown RBP12.6□□□□□ -0.39
HLA-DMB-260ENST00000477537 GNAQP50148 359 aa12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 KANK3Q6NY19 840 aa12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 GPKOWQ92917 476 aaPredicted RBP eCLIP12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 SMARCE1Q969G3 411 aa12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 TMEM47Q9BQJ4 181 aa12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 HSD3B7Q9H2F3 369 aa12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 GAKO14976 1311 aa12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 FLT1P17948 1338 aa12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 FAM205AQ6ZU69 1335 aa12.59□□□□□ -0.39
HLA-DMB-260ENST00000477537 ADAMTS3O15072 1205 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 BMP6P22004 513 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 CALML3P27482 149 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 RHBDL3P58872 404 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 GTF2IP78347 998 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 FANCCQ00597 558 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 C16orf86Q6ZW13 317 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 SYMPKQ92797 1274 aaKnown RBP12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 DHX58Q96C10 678 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 FAM163AQ96GL9 167 aaPredicted RBP12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 EPSTI1Q96J88 318 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 EYA3Q99504 573 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 STX8Q9UNK0 236 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 ATP6V0A2Q9Y487 856 aa12.58□□□□□ -0.39
HLA-DMB-260ENST00000477537 SNED1Q8TER0 1413 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 ATP1A3P13637 1013 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 TRAPPC10P48553 1259 aa12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 SARSP49591 514 aaKnown RBP12.58□□□□□ -0.4
HLA-DMB-260ENST00000477537 ATP2C1P98194 919 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms