RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 TRIM17Q9Y577 477 aa14.67□□□□□ -0.06
CLCNKA-205ENST00000477360 GREB1LQ9C091 1923 aaPredicted RBP14.66□□□□□ -0.06
CLCNKA-205ENST00000477360 SMIM22K7EJ46 135 aa14.66□□□□□ -0.06
CLCNKA-205ENST00000477360 TTLL1O95922 423 aa14.66□□□□□ -0.06
CLCNKA-205ENST00000477360 EEF2P13639 858 aaKnown RBP14.66□□□□□ -0.06
CLCNKA-205ENST00000477360 CHMLP26374 656 aa14.66□□□□□ -0.06
CLCNKA-205ENST00000477360 COG2Q14746 738 aa14.66□□□□□ -0.06
CLCNKA-205ENST00000477360 TCP11L1Q9NUJ3 509 aa14.66□□□□□ -0.06
CLCNKA-205ENST00000477360 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
CLCNKA-205ENST00000477360 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
CLCNKA-205ENST00000477360 PSMC4P43686 418 aa14.65□□□□□ -0.06
CLCNKA-205ENST00000477360 GMCL1P1Q8NEA9 526 aa14.65□□□□□ -0.06
CLCNKA-205ENST00000477360 GPRC5AQ8NFJ5 357 aa14.65□□□□□ -0.06
CLCNKA-205ENST00000477360 STAG1Q8WVM7 1258 aa14.65□□□□□ -0.06
CLCNKA-205ENST00000477360 P2RX7Q99572 595 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-205ENST00000477360 SRRDQ9UH36 339 aa14.65□□□□□ -0.06
CLCNKA-205ENST00000477360 MYH8P13535 1937 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 ZNF213O14771 459 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 SGSM2O43147 1006 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 CAPN2P17655 700 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 CCNA1P78396 465 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 TFAP4Q01664 338 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 IRF5Q13568 498 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 CCDC178Q5BJE1 867 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 AKNAD1Q5T1N1 836 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 ARMC5Q96C12 935 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 CEP95Q96GE4 821 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 TRIM47Q96LD4 638 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 TTC14Q96N46 770 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 RPAP3Q9H6T3 665 aaPredicted RBP14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 HPS5Q9UPZ3 1129 aa14.64□□□□□ -0.07
CLCNKA-205ENST00000477360 FMNL1O95466 1100 aaPredicted RBP14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 FDX1P10109 184 aa14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 MAPK4P31152 587 aa14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 IMMTQ16891 758 aaKnown RBP14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 MFSD6Q6ZSS7 791 aa14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 NBPF11Q86T75 865 aa14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 ANKRD13CQ8N6S4 541 aa14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 COA7Q96BR5 231 aa14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 RBPJLQ9UBG7 517 aa14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 ADAMTS5Q9UNA0 930 aa14.63□□□□□ -0.07
CLCNKA-205ENST00000477360 TSPY2A6NKD2 308 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 F5H6K3 240 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 PRDM1O75626 825 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 ERVK-9P63128 1117 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 ERVK-24P63145 666 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 KLRC3Q07444 240 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 RCSD1Q6JBY9 416 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 PXYLP1Q8TE99 480 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 ESR2Q92731 530 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 GMCL1Q96IK5 515 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 CNNM2Q9H8M5 875 aa14.62□□□□□ -0.07
CLCNKA-205ENST00000477360 SPDYE16A6NNV3 312 aaPredicted RBP14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 TNPO2O14787 897 aaKnown RBP14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 PLA2G6O60733 806 aa14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 DSG3P32926 999 aa14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 COPB2P35606 906 aa14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 CAP1Q01518 475 aa14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 ZYXQ15942 572 aaKnown RBP14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 SHCBP1Q8NEM2 672 aa14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 SOCS4Q8WXH5 440 aa14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 TANGO6Q9C0B7 1094 aa14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 CLIP2Q9UDT6 1046 aa14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 U3KPZ7 1027 aaPredicted RBP14.61□□□□□ -0.07
CLCNKA-205ENST00000477360 XRCC5P13010 732 aaKnown RBP14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 CTGFP29279 349 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 ATP2B2Q01814 1243 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 CTDSPL2Q05D32 466 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 DGKHQ86XP1 1220 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 TRMT44Q8IYL2 757 aaKnown RBP14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 SLAIN1Q8ND83 568 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 ANKS1AQ92625 1134 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 MAP4K1Q92918 833 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 KRT23Q9C075 422 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 ARHGAP39Q9C0H5 1083 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 TXNRD2Q9NNW7 524 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 IL17RBQ9NRM6 502 aa14.6□□□□□ -0.07
CLCNKA-205ENST00000477360 ATP2A1O14983 1001 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 STRNO43815 780 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 RANBP6O60518 1105 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 FLOT1O75955 427 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 NDUFB10O96000 172 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 FAM47AQ5JRC9 791 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 KIAA1755Q5JYT7 1200 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 CASC1Q6TDU7 716 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 KIAA1211Q6ZU35 1233 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 CLEC10AQ8IUN9 316 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 PRPF38AQ8NAV1 312 aaKnown RBP14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 MROH8Q9H579 483 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 FEM1BQ9UK73 627 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 PPP1R9AQ9ULJ8 1098 aa14.59□□□□□ -0.07
CLCNKA-205ENST00000477360 SLC25A27O95847 323 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 TOP1P11387 765 aaKnown RBP14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 RGS19P49795 217 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 OAZ1P54368 228 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 SLC9C1Q4G0N8 1177 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 POTEEQ6S8J3 1075 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 IQCA1Q86XH1 822 aa14.58□□□□□ -0.08
CLCNKA-205ENST00000477360 TBC1D10CQ8IV04 446 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms