RNA–Protein interactions for RNA: ENST00000477325.1

RPSA-206, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-206ENST00000477325 RAG1P15918 1043 aa11.68□□□□□ -0.54
RPSA-206ENST00000477325 MECOMQ03112 1051 aa11.68□□□□□ -0.54
RPSA-206ENST00000477325 EXOSC9Q06265 439 aaKnown RBP11.68□□□□□ -0.54
RPSA-206ENST00000477325 ATP2B3Q16720 1220 aa11.68□□□□□ -0.54
RPSA-206ENST00000477325 TMEM240Q5SV17 173 aa11.68□□□□□ -0.54
RPSA-206ENST00000477325 LBX2Q6XYB7 198 aa11.68□□□□□ -0.54
RPSA-206ENST00000477325 SLF2Q8IX21 1173 aa11.68□□□□□ -0.54
RPSA-206ENST00000477325 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
RPSA-206ENST00000477325 C12orf42Q96LP6 360 aa11.68□□□□□ -0.54
RPSA-206ENST00000477325 GNL3LQ9NVN8 582 aaKnown RBP11.68□□□□□ -0.54
RPSA-206ENST00000477325 FOCADQ5VW36 1801 aa11.67□□□□□ -0.54
RPSA-206ENST00000477325 PRRC2BQ5JSZ5 2229 aaKnown RBP11.67□□□□□ -0.54
RPSA-206ENST00000477325 LRRC37A2A6NM11 1700 aa11.67□□□□□ -0.54
RPSA-206ENST00000477325 MAP4K4O95819 1239 aaPredicted RBP11.67□□□□□ -0.54
RPSA-206ENST00000477325 ADORA1P30542 326 aa11.67□□□□□ -0.54
RPSA-206ENST00000477325 CCNA1P78396 465 aa11.67□□□□□ -0.54
RPSA-206ENST00000477325 CCDC102BQ68D86 513 aa11.67□□□□□ -0.54
RPSA-206ENST00000477325 ANKRD33Q7Z3H0 272 aa11.67□□□□□ -0.54
RPSA-206ENST00000477325 ABCF2Q9UG63 623 aa11.67□□□□□ -0.54
RPSA-206ENST00000477325 TBX21Q9UL17 535 aa11.67□□□□□ -0.54
RPSA-206ENST00000477325 IGFBP4P22692 258 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 PRAMEF19Q5SWL8 479 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 CATSPERGQ6ZRH7 1159 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 WDR63Q8IWG1 891 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 TOX2Q96NM4 488 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 TMEM39AQ9NV64 488 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 PI4KBQ9UBF8 816 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 ZBTB21Q9ULJ3 1066 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 CACNA1AO00555 2505 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 A0A0G2JMZ2 1700 aa11.66□□□□□ -0.54
RPSA-206ENST00000477325 A0A1W2PQ45 241 aaPredicted RBP11.65□□□□□ -0.54
RPSA-206ENST00000477325 A0A1W2PQY0 241 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 FAM86C2PA6NEL3 165 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 ERC2O15083 957 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 PQBP1O60828 265 aaKnown RBP11.65□□□□□ -0.54
RPSA-206ENST00000477325 COBLO75128 1261 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 GDF11O95390 407 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 TIMP1P01033 207 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 ADORA2AP29274 412 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 MRE11P49959 708 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 WDR78Q5VTH9 848 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 MFSD5Q6N075 450 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 USP17L2Q6R6M4 530 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 FAM9BQ8IZU0 186 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 SLC44A5Q8NCS7 719 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 NSUN4Q96CB9 384 aaKnown RBP11.65□□□□□ -0.54
RPSA-206ENST00000477325 USP44Q9H0E7 712 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 CWC22Q9HCG8 908 aaKnown RBP11.65□□□□□ -0.54
RPSA-206ENST00000477325 GINM1Q9NU53 330 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 YBX2Q9Y2T7 364 aaKnown RBP11.65□□□□□ -0.54
RPSA-206ENST00000477325 IVNS1ABPQ9Y6Y0 642 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 MYO15AQ9UKN7 3530 aa11.65□□□□□ -0.54
RPSA-206ENST00000477325 SPDYE16A6NNV3 312 aaPredicted RBP11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L15C9J2P7 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L13C9JLJ4 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L11C9JVI0 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L18D6R9N7 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L22D6RA61 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L17D6RBQ6 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L19D6RCP7 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L20D6RJB6 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 TLL1O43897 1013 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 CIAO1O76071 339 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 USP17L24Q0WX57 530 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 SPTY2D1Q68D10 685 aaPredicted RBP11.64□□□□□ -0.55
RPSA-206ENST00000477325 CCDC129Q6ZRS4 1044 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 ZNFX1Q9P2E3 1918 aaKnown RBP11.64□□□□□ -0.55
RPSA-206ENST00000477325 BRWD1Q9NSI6 2320 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 DCHS1Q96JQ0 3298 aa11.64□□□□□ -0.55
RPSA-206ENST00000477325 AAK1Q2M2I8 961 aa11.63□□□□□ -0.55
RPSA-206ENST00000477325 ERICH6Q7L0X2 663 aa11.63□□□□□ -0.55
RPSA-206ENST00000477325 DPP9Q86TI2 863 aa11.63□□□□□ -0.55
RPSA-206ENST00000477325 SH3RF3Q8TEJ3 882 aaPredicted RBP11.63□□□□□ -0.55
RPSA-206ENST00000477325 DHX36Q9H2U1 1008 aaKnown RBP11.63□□□□□ -0.55
RPSA-206ENST00000477325 NKX2-4Q9H2Z4 354 aa11.63□□□□□ -0.55
RPSA-206ENST00000477325 XPNPEP3Q9NQH7 507 aa11.63□□□□□ -0.55
RPSA-206ENST00000477325 CEP126Q9P2H0 1117 aa11.63□□□□□ -0.55
RPSA-206ENST00000477325 ROBO3Q96MS0 1386 aa11.63□□□□□ -0.55
RPSA-206ENST00000477325 DMDP11532 3685 aa11.63□□□□□ -0.55
RPSA-206ENST00000477325 STRNO43815 780 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 ADAMTS4O75173 837 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 PGK1P00558 417 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 CSF2RAP15509 400 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 VCAM1P19320 739 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 POU3F3P20264 500 aaPredicted RBP11.62□□□□□ -0.55
RPSA-206ENST00000477325 PPIGQ13427 754 aaKnown RBP eCLIP11.62□□□□□ -0.55
RPSA-206ENST00000477325 RAB30Q15771 203 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 ZNF365Q70YC5 407 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 FOXP4Q8IVH2 680 aaPredicted RBP11.62□□□□□ -0.55
RPSA-206ENST00000477325 TEX11Q8IYF3 940 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 HERVK_113Q902F9 699 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 MAML3Q96JK9 1138 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 MOV10L1Q9BXT6 1211 aaKnown RBP11.62□□□□□ -0.55
RPSA-206ENST00000477325 SIL1Q9H173 461 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 CD320Q9NPF0 282 aa11.62□□□□□ -0.55
RPSA-206ENST00000477325 PI4K2BG5E9Z4 385 aa11.61□□□□□ -0.55
RPSA-206ENST00000477325 SEC24BO95487 1268 aa11.61□□□□□ -0.55
RPSA-206ENST00000477325 ACRP10323 421 aa11.61□□□□□ -0.55
RPSA-206ENST00000477325 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
RPSA-206ENST00000477325 TIMM10P62072 90 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms