RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.81■□□□□ 0.92
SREBF1-211ENST00000476994 KRT23Q9C075 422 aa20.81■□□□□ 0.92
SREBF1-211ENST00000476994 KDM4AO75164 1064 aa20.8■□□□□ 0.92
SREBF1-211ENST00000476994 ECM2O94769 699 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-211ENST00000476994 MYCP01106 439 aaPredicted RBP20.8■□□□□ 0.92
SREBF1-211ENST00000476994 AKR1B1P15121 316 aa20.8■□□□□ 0.92
SREBF1-211ENST00000476994 EXOSC10Q01780 885 aaKnown RBP20.8■□□□□ 0.92
SREBF1-211ENST00000476994 MKNK2Q9HBH9 465 aa20.8■□□□□ 0.92
SREBF1-211ENST00000476994 ZSWIM5Q9P217 1185 aa20.8■□□□□ 0.92
SREBF1-211ENST00000476994 SRRDQ9UH36 339 aa20.8■□□□□ 0.92
SREBF1-211ENST00000476994 IGKV6D-41A0A0C4DH26 115 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 PTPRAP18433 802 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 CASTP20810 708 aaKnown RBP20.79■□□□□ 0.92
SREBF1-211ENST00000476994 RPS6KB1P23443 525 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 FCGRTP55899 365 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 FAM47AQ5JRC9 791 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 RRP12Q5JTH9 1297 aaKnown RBP20.79■□□□□ 0.92
SREBF1-211ENST00000476994 GADL1Q6ZQY3 521 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 SH3TC2Q8TF17 1288 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 TTC14Q96N46 770 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 UPF3BQ9BZI7 483 aaKnown RBP20.79■□□□□ 0.92
SREBF1-211ENST00000476994 ZNF287Q9HBT7 754 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 PCDH10Q9P2E7 1040 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 BRCA2P51587 3418 aa20.79■□□□□ 0.92
SREBF1-211ENST00000476994 MKI67P46013 3256 aaKnown RBP20.79■□□□□ 0.92
SREBF1-211ENST00000476994 WDR19Q8NEZ3 1342 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 A0A0G2JLL6 359 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-211ENST00000476994 PSMA5P28066 241 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 GUCY1A2P33402 732 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 TRDNQ13061 729 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 CERKLQ49MI3 558 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-211ENST00000476994 RUFY3Q7L099 469 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 DHX32Q7L7V1 743 aaKnown RBP20.78■□□□□ 0.92
SREBF1-211ENST00000476994 PRRT2Q7Z6L0 340 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-211ENST00000476994 RALYLQ86SE5 291 aaKnown RBP20.78■□□□□ 0.92
SREBF1-211ENST00000476994 NEDD1Q8NHV4 660 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 SMCR8Q8TEV9 937 aaPredicted RBP20.78■□□□□ 0.92
SREBF1-211ENST00000476994 ESR2Q92731 530 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 CCDC17Q96LX7 622 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 MYPNQ86TC9 1320 aa20.78■□□□□ 0.92
SREBF1-211ENST00000476994 RANBP6O60518 1105 aaKnown RBP20.77■□□□□ 0.92
SREBF1-211ENST00000476994 HMGB1P09429 215 aaKnown RBP20.77■□□□□ 0.92
SREBF1-211ENST00000476994 NOVP48745 357 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 TFAP4Q01664 338 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 BLOC1S2Q6QNY1 142 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 ZNF444Q8N0Y2 327 aaPredicted RBP20.77■□□□□ 0.92
SREBF1-211ENST00000476994 TRIM47Q96LD4 638 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 TRIM34Q9BYJ4 488 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 AGXT2Q9BYV1 514 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 IL17RBQ9NRM6 502 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 TOMM22Q9NS69 142 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 BIN2Q9UBW5 565 aaPredicted RBP20.77■□□□□ 0.92
SREBF1-211ENST00000476994 SLC45A1Q9Y2W3 748 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 AFG3L2Q9Y4W6 797 aa20.77■□□□□ 0.92
SREBF1-211ENST00000476994 ADGRA2Q96PE1 1338 aa20.77■□□□□ 0.91
SREBF1-211ENST00000476994 GDF11O95390 407 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 CYP2C8P10632 490 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 OSBPP22059 807 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 MCM5P33992 734 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 CAP2P40123 477 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 MOGSQ13724 837 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 RABEP1Q15276 862 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 SEC23AQ15436 765 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 CHST3Q7LGC8 479 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 TCEANC2Q96MN5 208 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 MTA3Q9BTC8 594 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 TCP11L1Q9NUJ3 509 aa20.76■□□□□ 0.91
SREBF1-211ENST00000476994 TRIM75PA6NK02 468 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 PRC1O43663 620 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 NMT2O60551 498 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 GRK4P32298 578 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 UBXN2AP68543 259 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 RCSD1Q6JBY9 416 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 GPAT2Q6NUI2 795 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 FBXL16Q8N461 479 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 IGDCC4Q8TDY8 1250 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 TBC1D2Q9BYX2 928 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 GPHNQ9NQX3 736 aaPredicted RBP20.75■□□□□ 0.91
SREBF1-211ENST00000476994 TSHZ2Q9NRE2 1034 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 PNMA3Q9UL41 463 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 ZBTB21Q9ULJ3 1066 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 CYP46A1Q9Y6A2 500 aa20.75■□□□□ 0.91
SREBF1-211ENST00000476994 TSPY2A6NKD2 308 aa20.74■□□□□ 0.91
SREBF1-211ENST00000476994 GH2P01242 217 aa20.74■□□□□ 0.91
SREBF1-211ENST00000476994 TSPY3P0CV98 308 aa20.74■□□□□ 0.91
SREBF1-211ENST00000476994 TSPY8P0CW00 308 aa20.74■□□□□ 0.91
SREBF1-211ENST00000476994 BCRP11274 1271 aa20.74■□□□□ 0.91
SREBF1-211ENST00000476994 ABCB5Q2M3G0 1257 aa20.74■□□□□ 0.91
SREBF1-211ENST00000476994 LRRC2Q9BYS8 371 aa20.74■□□□□ 0.91
SREBF1-211ENST00000476994 ALDH8A1Q9H2A2 487 aaPredicted RBP20.74■□□□□ 0.91
SREBF1-211ENST00000476994 SH2B2O14492 632 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-211ENST00000476994 TOB2Q14106 344 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-211ENST00000476994 TMEM179Q6ZVK1 233 aa20.73■□□□□ 0.91
SREBF1-211ENST00000476994 CLEC10AQ8IUN9 316 aa20.73■□□□□ 0.91
SREBF1-211ENST00000476994 SIAH1Q8IUQ4 282 aa20.73■□□□□ 0.91
SREBF1-211ENST00000476994 ENAHQ8N8S7 591 aaPredicted RBP20.73■□□□□ 0.91
SREBF1-211ENST00000476994 ANKS1AQ92625 1134 aa20.73■□□□□ 0.91
SREBF1-211ENST00000476994 CEP95Q96GE4 821 aa20.73■□□□□ 0.91
SREBF1-211ENST00000476994 ZKSCAN3Q9BRR0 538 aa20.73■□□□□ 0.91
SREBF1-211ENST00000476994 SENP2Q9HC62 589 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms