RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 CATIPQ7Z7H3 387 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 CCDC84Q86UT8 332 aaPredicted RBP15.45■□□□□ 0.06
PSMB4-204ENST00000476467 ZNF654Q8IZM8 581 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 PNMA1Q8ND90 353 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 LARP6Q9BRS8 491 aaKnown RBP15.45■□□□□ 0.06
PSMB4-204ENST00000476467 WDR18Q9BV38 432 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 SH2D4AQ9H788 454 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 DDAH1O94760 285 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 RCAN1P53805 252 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 SYNE3Q6ZMZ3 975 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 CLEC17AQ6ZS10 378 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 LRRC47Q8N1G4 583 aaKnown RBP15.45■□□□□ 0.06
PSMB4-204ENST00000476467 ACER1Q8TDN7 264 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 ZNF274Q96GC6 653 aaPredicted RBP15.45■□□□□ 0.06
PSMB4-204ENST00000476467 CLMNQ96JQ2 1002 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 ZSCAN31Q96LW9 406 aaPredicted RBP15.45■□□□□ 0.06
PSMB4-204ENST00000476467 ELP3Q9H9T3 547 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 TPCN1Q9ULQ1 816 aa15.45■□□□□ 0.06
PSMB4-204ENST00000476467 GOLGA8BA8MQT2 603 aa15.44■□□□□ 0.06
PSMB4-204ENST00000476467 SH2B1Q9NRF2 756 aaPredicted RBP15.44■□□□□ 0.06
PSMB4-204ENST00000476467 NAP1L2Q9ULW6 460 aaPredicted RBP15.44■□□□□ 0.06
PSMB4-204ENST00000476467 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
PSMB4-204ENST00000476467 A0A1W2PRG0 241 aa15.44■□□□□ 0.06
PSMB4-204ENST00000476467 SPDYE5A6NIY4 337 aa15.44■□□□□ 0.06
PSMB4-204ENST00000476467 ZBTB43O43298 467 aa15.44■□□□□ 0.06
PSMB4-204ENST00000476467 ERO1BQ86YB8 467 aa15.44■□□□□ 0.06
PSMB4-204ENST00000476467 NID2Q14112 1375 aa15.44■□□□□ 0.06
PSMB4-204ENST00000476467 LARGE1O95461 756 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 CALM1P0DP23 149 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 CALM2P0DP24 149 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 CALM3P0DP25 149 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 PDIA3P30101 505 aaKnown RBP15.43■□□□□ 0.06
PSMB4-204ENST00000476467 ECE1P42892 770 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 TROAPQ12815 778 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 MICU3Q86XE3 530 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 ZNF280CQ8ND82 737 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 GMCL1P1Q8NEA9 526 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 FEZ1Q99689 392 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 MYL10Q9BUA6 226 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 KIAA1683Q9H0B3 1180 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 CWC22Q9HCG8 908 aaKnown RBP15.43■□□□□ 0.06
PSMB4-204ENST00000476467 ZHX2Q9Y6X8 837 aa15.43■□□□□ 0.06
PSMB4-204ENST00000476467 PTMSP20962 102 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 PPATQ06203 517 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 ME3Q16798 604 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 TMX3Q96JJ7 454 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 GOPCQ9HD26 462 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 HPS5Q9UPZ3 1129 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 GOLGA8AA7E2F4 631 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 PFKFB2O60825 505 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 METAP2P50579 478 aaKnown RBP eCLIP15.42■□□□□ 0.068e-6■■□□□ 13.7
PSMB4-204ENST00000476467 HUNKP57058 714 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 NUCB2P80303 420 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 SPP2Q13103 211 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 PPIL2Q13356 520 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 RAB11FIP4Q86YS3 637 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 NUP133Q8WUM0 1156 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 SLC10A4Q96EP9 437 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 MAP3K14Q99558 947 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 AFG3L2Q9Y4W6 797 aa15.42■□□□□ 0.06
PSMB4-204ENST00000476467 FSD2A1L4K1 749 aa15.41■□□□□ 0.06
PSMB4-204ENST00000476467 USP17L10C9JJH3 530 aa15.41■□□□□ 0.06
PSMB4-204ENST00000476467 USP14P54578 494 aa15.41■□□□□ 0.06
PSMB4-204ENST00000476467 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
PSMB4-204ENST00000476467 OTUD5Q96G74 571 aa15.41■□□□□ 0.06
PSMB4-204ENST00000476467 VCPKMTQ9H867 229 aa15.41■□□□□ 0.06
PSMB4-204ENST00000476467 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.41■□□□□ 0.06
PSMB4-204ENST00000476467 PTPRFP10586 1907 aa15.41■□□□□ 0.06
PSMB4-204ENST00000476467 TRIM75PA6NK02 468 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 TMEM88BA6NKF7 163 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 F5H6K3 240 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 NDUFB10O96000 172 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 SNHG28P0DPA3 235 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 PDHBP11177 359 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 RXRAP19793 462 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 KLRC3Q07444 240 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 STK3Q13188 491 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 MTMR2Q13614 643 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 GRM4Q14833 912 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 RTN1Q16799 776 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 L1TD1Q5T7N2 865 aaKnown RBP15.4■□□□□ 0.06
PSMB4-204ENST00000476467 DCAF4Q8WV16 495 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 GTF3C6Q969F1 213 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 OPTNQ96CV9 577 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 GZF1Q9H116 711 aaPredicted RBP15.4■□□□□ 0.06
PSMB4-204ENST00000476467 MTMR7Q9Y216 660 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 TLL2Q9Y6L7 1015 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 C19orf81C9J6K1 198 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 BACE1P56817 501 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 PPP2R5BQ15173 497 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 ZYXQ15942 572 aaKnown RBP15.4■□□□□ 0.06
PSMB4-204ENST00000476467 SLFN13Q68D06 897 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 SAPCD2Q86UD0 394 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 FANCBQ8NB91 859 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 CTCFLQ8NI51 663 aaPredicted RBP15.4■□□□□ 0.06
PSMB4-204ENST00000476467 GMCL1Q96IK5 515 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 KCNH4Q9UQ05 1017 aa15.4■□□□□ 0.06
PSMB4-204ENST00000476467 BAG4O95429 457 aaKnown RBP15.39■□□□□ 0.05
PSMB4-204ENST00000476467 KIF5BP33176 963 aa15.39■□□□□ 0.05
PSMB4-204ENST00000476467 CCT2P78371 535 aaKnown RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms