RNA–Protein interactions for RNA: ENST00000475980.1

COL11A1-209, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-209ENST00000475980 NEFMP07197 916 aa8.3□□□□□ -1.08
COL11A1-209ENST00000475980 IGHMBP2P38935 993 aaKnown RBP8.3□□□□□ -1.08
COL11A1-209ENST00000475980 HDLBPQ00341 1268 aaKnown RBP8.3□□□□□ -1.08
COL11A1-209ENST00000475980 NHLH1Q02575 133 aa8.3□□□□□ -1.08
COL11A1-209ENST00000475980 PTCRAQ6ISU1 281 aaPredicted RBP8.3□□□□□ -1.08
COL11A1-209ENST00000475980 ZNF804AQ7Z570 1209 aa8.3□□□□□ -1.08
COL11A1-209ENST00000475980 TRMT44Q8IYL2 757 aaKnown RBP8.3□□□□□ -1.08
COL11A1-209ENST00000475980 CWC25Q9NXE8 425 aaPredicted RBP8.3□□□□□ -1.08
COL11A1-209ENST00000475980 TTF2Q9UNY4 1162 aaKnown RBP8.3□□□□□ -1.08
COL11A1-209ENST00000475980 DOCK1Q14185 1865 aa8.3□□□□□ -1.08
COL11A1-209ENST00000475980 PLXNA1Q9UIW2 1896 aa8.3□□□□□ -1.08
COL11A1-209ENST00000475980 DOCK2Q92608 1830 aa8.29□□□□□ -1.08
COL11A1-209ENST00000475980 PRR33A8MZF0 331 aa8.29□□□□□ -1.08
COL11A1-209ENST00000475980 HSPA5P11021 654 aaKnown RBP8.29□□□□□ -1.08
COL11A1-209ENST00000475980 KCNJ4P48050 445 aa8.29□□□□□ -1.08
COL11A1-209ENST00000475980 RTP1P59025 263 aa8.29□□□□□ -1.08
COL11A1-209ENST00000475980 LYPD4Q6UWN0 246 aa8.29□□□□□ -1.08
COL11A1-209ENST00000475980 TIFAQ96CG3 184 aa8.29□□□□□ -1.08
COL11A1-209ENST00000475980 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
COL11A1-209ENST00000475980 DCHS1Q96JQ0 3298 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 MYO15AQ9UKN7 3530 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.28□□□□□ -1.08
COL11A1-209ENST00000475980 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.28□□□□□ -1.08
COL11A1-209ENST00000475980 SMIM22K7EJ46 135 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 CRKP46108 304 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 GCLCP48506 637 aaPredicted RBP8.28□□□□□ -1.08
COL11A1-209ENST00000475980 PDE3AQ14432 1141 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 SNX17Q15036 470 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 MFSD14BQ5SR56 506 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 HDGFL1Q5TGJ6 251 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 ANKRD13CQ8N6S4 541 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 SOCS4Q8WXH5 440 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 BADQ92934 168 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 PLEKHF1Q96S99 279 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 ENAMQ9NRM1 1142 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 CACNA1BQ00975 2339 aa8.28□□□□□ -1.08
COL11A1-209ENST00000475980 PI4K2BG5E9Z4 385 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 DNM1LO00429 736 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 ERC2O15083 957 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 ZIC2O95409 532 aaPredicted RBP8.27□□□□□ -1.09
COL11A1-209ENST00000475980 JUNDP17535 347 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 PTSQ03393 145 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 CHRNDQ07001 517 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 CACNB2Q08289 660 aaPredicted RBP8.27□□□□□ -1.09
COL11A1-209ENST00000475980 ADGRE1Q14246 886 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.27□□□□□ -1.09
COL11A1-209ENST00000475980 C1orf53Q5VUE5 145 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 PPM1EQ8WY54 764 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 MRIQ9BWK5 157 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 SENP6Q9GZR1 1112 aaPredicted RBP8.27□□□□□ -1.09
COL11A1-209ENST00000475980 PDLIM7Q9NR12 457 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 TMOD2Q9NZR1 351 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 AGTPBP1Q9UPW5 1226 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 ZFHX4Q86UP3 3567 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 CNTNAP5Q8WYK1 1306 aa8.27□□□□□ -1.09
COL11A1-209ENST00000475980 DMDP11532 3685 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 MSCO60682 206 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 ZKSCAN1P17029 563 aaPredicted RBP8.26□□□□□ -1.09
COL11A1-209ENST00000475980 MIGA2Q7L4E1 593 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 BEND7Q8N7W2 519 aaPredicted RBP8.26□□□□□ -1.09
COL11A1-209ENST00000475980 ZDHHC15Q96MV8 337 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 MPHOSPH8Q99549 860 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 MYD88Q99836 296 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 NUDT12Q9BQG2 462 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 ZFAND3Q9H8U3 227 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 AFG3L2Q9Y4W6 797 aa8.26□□□□□ -1.09
COL11A1-209ENST00000475980 FAM86C2PA6NEL3 165 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 PTPRAP18433 802 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 ITGA6P23229 1130 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 VARSP26640 1264 aaKnown RBP8.25□□□□□ -1.09
COL11A1-209ENST00000475980 CCND3P30281 292 aaPredicted RBP8.25□□□□□ -1.09
COL11A1-209ENST00000475980 KCNQ1P51787 676 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 CACNB3P54284 484 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 GADL1Q6ZQY3 521 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 SCYL3Q8IZE3 742 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 TDRD7Q8NHU6 1098 aaKnown RBP8.25□□□□□ -1.09
COL11A1-209ENST00000475980 FAM151AQ8WW52 585 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 LPAR1Q92633 364 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 USP6NLQ92738 828 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 TEKT1Q969V4 418 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 PLA2G12BQ9BX93 195 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 PRDM12Q9H4Q4 367 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 MORF4L1Q9UBU8 362 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 JAG2Q9Y219 1238 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 ATP11BQ9Y2G3 1177 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 GBF1Q92538 1859 aa8.25□□□□□ -1.09
COL11A1-209ENST00000475980 MYBBP1AQ9BQG0 1328 aaKnown RBP8.25□□□□□ -1.09
COL11A1-209ENST00000475980 ATRNL1Q5VV63 1379 aa8.24□□□□□ -1.09
COL11A1-209ENST00000475980 TRIOO75962 3097 aa8.24□□□□□ -1.09
COL11A1-209ENST00000475980 CYP2B6P20813 491 aa8.24□□□□□ -1.09
COL11A1-209ENST00000475980 EPHB4P54760 987 aa8.24□□□□□ -1.09
COL11A1-209ENST00000475980 TFF2Q03403 129 aa8.24□□□□□ -1.09
COL11A1-209ENST00000475980 CCDC85BQ15834 202 aaPredicted RBP8.24□□□□□ -1.09
COL11A1-209ENST00000475980 KRT24Q2M2I5 525 aa8.24□□□□□ -1.09
COL11A1-209ENST00000475980 APOBEC3HQ6NTF7 200 aaKnown RBP8.24□□□□□ -1.09
COL11A1-209ENST00000475980 SLC39A5Q6ZMH5 540 aa8.24□□□□□ -1.09
COL11A1-209ENST00000475980 PROCA1Q8NCQ7 364 aaPredicted RBP8.24□□□□□ -1.09
COL11A1-209ENST00000475980 HERVK_113Q902F9 699 aa8.24□□□□□ -1.09
COL11A1-209ENST00000475980 JARID2Q92833 1246 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms