RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 LRRC2Q9BYS8 371 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 NCOA5Q9HCD5 579 aaKnown RBP7.91□□□□□ -1.14
UBR4-212ENST00000475973 ZNF215Q9UL58 517 aaPredicted RBP7.91□□□□□ -1.14
UBR4-212ENST00000475973 CLIC4Q9Y696 253 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 NDUFB9Q9Y6M9 179 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 SLX4Q8IY92 1834 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 FER1L6Q2WGJ9 1857 aa7.91□□□□□ -1.14
UBR4-212ENST00000475973 TCRBV5S4A2TA0A5A2 114 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 ATP5J2-PTCD1G3V325 749 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 SH2B2O14492 632 aaPredicted RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 FANCGO15287 622 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 ZNF202O95125 648 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 ZNF18P17022 549 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 ADD2P35612 726 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 LIFRP42702 1097 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 ETF1P62495 437 aaKnown RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 CBX1P83916 185 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 NAA30Q147X3 362 aaPredicted RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 AOC3Q16853 763 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 TPD52L1Q16890 204 aaPredicted RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 SHC4Q6S5L8 630 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 FOXP4Q8IVH2 680 aaPredicted RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 REXO1L1PQ8IX06 675 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 SP8Q8IXZ3 490 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 MSL3Q8N5Y2 521 aaKnown RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 AOPEPQ8N6M6 819 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 PROCA1Q8NCQ7 364 aaPredicted RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 IGDCC4Q8TDY8 1250 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 PPP1R13BQ96KQ4 1090 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 DNAJC2Q99543 621 aaKnown RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 NOL10Q9BSC4 688 aaKnown RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 RTFDC1Q9BY42 306 aaPredicted RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 PUS3Q9BZE2 481 aaKnown RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 XPO4Q9C0E2 1151 aaKnown RBP7.9□□□□□ -1.14
UBR4-212ENST00000475973 ZNF446Q9NWS9 450 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 AKAP2Q9Y2D5 859 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 CHMP3Q9Y3E7 222 aa7.9□□□□□ -1.14
UBR4-212ENST00000475973 ARAP2Q8WZ64 1704 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 PASKQ96RG2 1323 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 RCCD1A6NED2 376 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 TMEM88BA6NKF7 163 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 BECN2A8MW95 431 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 IRS4O14654 1257 aaPredicted RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 PRC1O43663 620 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 SLC3A2P08195 630 aaKnown RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 PFKFB1P16118 471 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 FGFR2P21802 821 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 ARID4AP29374 1257 aaPredicted RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 CCT2P78371 535 aaKnown RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 SCARF1Q14162 830 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 SF3B3Q15393 1217 aaKnown RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 TERF2Q15554 542 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 IMMTQ16891 758 aaKnown RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 USP50Q70EL3 339 aaPredicted RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 APTXQ7Z2E3 356 aaKnown RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 VSTM4Q8IW00 320 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 NCOA7Q8NI08 942 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 NKX2-3Q8TAU0 364 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 FAM89AQ96GI7 184 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 XAGE2Q96GT9 111 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 TMEM87BQ96K49 555 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 EYA3Q99504 573 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.89□□□□□ -1.15
UBR4-212ENST00000475973 SRRTQ9BXP5 876 aaKnown RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 ORC3Q9UBD5 711 aaPredicted RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 MKRN1Q9UHC7 482 aaKnown RBP7.89□□□□□ -1.15
UBR4-212ENST00000475973 ZNRF3Q9ULT6 936 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 SBF1O95248 1867 aa7.89□□□□□ -1.15
UBR4-212ENST00000475973 CNTNAP1P78357 1384 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 MROH7-TTC4A0A0A0MT08 1334 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 DOCK2Q92608 1830 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 A0A1B0GVL5 298 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 PPP1R3GB7ZBB8 358 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 CCP110O43303 1012 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 CUTAO60888 179 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 HSPA1AP0DMV8 641 aaKnown RBP7.88□□□□□ -1.15
UBR4-212ENST00000475973 HSPA1BP0DMV9 641 aaKnown RBP7.88□□□□□ -1.15
UBR4-212ENST00000475973 BMP6P22004 513 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 PTPREP23469 700 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 ME1P48163 572 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 SCNN1DP51172 638 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 FANCCQ00597 558 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 TNIP1Q15025 636 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 DIXDC1Q155Q3 683 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 CCDC152Q4G0S7 254 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 CIAPIN1Q6FI81 312 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 FBXO38Q6PIJ6 1188 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 DRC7Q8IY82 874 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 ZBTB38Q8NAP3 1195 aaPredicted RBP7.88□□□□□ -1.15
UBR4-212ENST00000475973 C8orf76Q96K31 380 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 MED15Q96RN5 788 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 PUS7LQ9H0K6 701 aaKnown RBP7.88□□□□□ -1.15
UBR4-212ENST00000475973 ADARB2Q9NS39 739 aaKnown RBP7.88□□□□□ -1.15
UBR4-212ENST00000475973 INTS13Q9NVM9 706 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 CEP126Q9P2H0 1117 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 TSKSQ9UJT2 592 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 ANGEL1Q9UNK9 670 aaKnown RBP7.88□□□□□ -1.15
UBR4-212ENST00000475973 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.88□□□□□ -1.152e-8■■□□□ 13.2
UBR4-212ENST00000475973 FHOD1Q9Y613 1164 aa7.88□□□□□ -1.15
UBR4-212ENST00000475973 MYH7P12883 1935 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms