RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 ZNF236Q9UL36 1845 aa13.1□□□□□ -0.31
CDRT1-205ENST00000475944 A0A1W2PRG0 241 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 TCRBV5S4A2TA0A5A2 114 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 APBB1O00213 710 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 DNM1LO00429 736 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 ADORA2AP29274 412 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 CYP2C19P33261 490 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 OLFML2BQ68BL8 750 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 LCORLQ8N3X6 602 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 SHCBP1Q8NEM2 672 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 MOV10L1Q9BXT6 1211 aaKnown RBP13.09□□□□□ -0.31
CDRT1-205ENST00000475944 SENP6Q9GZR1 1112 aaPredicted RBP13.09□□□□□ -0.31
CDRT1-205ENST00000475944 SPATC1LQ9H0A9 340 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 ARHGEF10LQ9HCE6 1279 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 SLC5A4Q9NY91 659 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 ZBED9Q6R2W3 1325 aa13.09□□□□□ -0.31
CDRT1-205ENST00000475944 A0A0G2JMZ2 1700 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 RAB11FIP3O75154 756 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 CYBAP13498 195 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 MDM2Q00987 491 aaPredicted RBP13.08□□□□□ -0.32
CDRT1-205ENST00000475944 EVX2Q03828 476 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 AMOTL1Q8IY63 956 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 SLC44A5Q8NCS7 719 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 LBHD1Q9BQE6 289 aaPredicted RBP13.08□□□□□ -0.32
CDRT1-205ENST00000475944 ARMT1Q9H993 441 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 ATP8A2Q9NTI2 1148 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 PAG1Q9NWQ8 432 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 DDX19BQ9UMR2 479 aa13.08□□□□□ -0.32
CDRT1-205ENST00000475944 FLOT1O75955 427 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 CYP2D6P10635 497 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 ERCC3P19447 782 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 DSG3P32926 999 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 ADD2P35612 726 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 ICA1Q05084 483 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 PLS1Q14651 629 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 ABRAQ8N0Z2 381 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 ARRDC4Q8NCT1 418 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 DDRGK1Q96HY6 314 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 CCDC17Q96LX7 622 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDRT1-205ENST00000475944 BCL11AQ9H165 835 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 CHMP4BQ9H444 224 aaKnown RBP13.07□□□□□ -0.32
CDRT1-205ENST00000475944 MROH8Q9H579 483 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 PRKAG2Q9UGJ0 569 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 TMX2Q9Y320 296 aa13.07□□□□□ -0.32
CDRT1-205ENST00000475944 LAMA3Q16787 3333 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 KBTBD13C9JR72 458 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 DLL1O00548 723 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 MBD4O95243 580 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 IGHA2P01877 340 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 ATN1P54259 1190 aaPredicted RBP13.06□□□□□ -0.32
CDRT1-205ENST00000475944 Q7L0L9 218 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 NCAPG2Q86XI2 1143 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 MIER1Q8N108 512 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 ATG4CQ96DT6 458 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 DYNLL2Q96FJ2 89 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 BOLA2Q9H3K6 86 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 VCPKMTQ9H867 229 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 STXBP5LQ9Y2K9 1186 aa13.06□□□□□ -0.32
CDRT1-205ENST00000475944 MYH8P13535 1937 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 WDR46O15213 610 aaKnown RBP13.05□□□□□ -0.32
CDRT1-205ENST00000475944 SEPT4O43236 478 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 AKR1B1P15121 316 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 ATP5JP18859 108 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 GJC2Q5T442 439 aaPredicted RBP13.05□□□□□ -0.32
CDRT1-205ENST00000475944 SIRT2Q8IXJ6 389 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 SPICE1Q8N0Z3 855 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 ZBTB40Q9NUA8 1239 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 MTMR10Q9NXD2 777 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 RLFQ13129 1914 aa13.05□□□□□ -0.32
CDRT1-205ENST00000475944 USP17L12C9JPN9 530 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 USP17L21D6R901 530 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 PRKAB2O43741 272 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 COBLO75128 1261 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 SLC25A27O95847 323 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 FCER1AP12319 257 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 CDK8P49336 464 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 RTP1P59025 263 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 C12orf60Q5U649 245 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 ZSCAN25Q6NSZ9 544 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 C16orf86Q6ZW13 317 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 CLEC10AQ8IUN9 316 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 HAUS7Q99871 368 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 ATP11BQ9Y2G3 1177 aa13.04□□□□□ -0.32
CDRT1-205ENST00000475944 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-205ENST00000475944 UBE3CQ15386 1083 aa13.03□□□□□ -0.32
CDRT1-205ENST00000475944 SLFNL1Q499Z3 407 aa13.03□□□□□ -0.32
CDRT1-205ENST00000475944 ANO1Q5XXA6 986 aa13.03□□□□□ -0.32
CDRT1-205ENST00000475944 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
CDRT1-205ENST00000475944 SLC39A5Q6ZMH5 540 aa13.03□□□□□ -0.32
CDRT1-205ENST00000475944 SIAH1Q8IUQ4 282 aa13.03□□□□□ -0.32
CDRT1-205ENST00000475944 MAML3Q96JK9 1138 aa13.03□□□□□ -0.32
CDRT1-205ENST00000475944 KANSL2Q9H9L4 492 aa13.03□□□□□ -0.32
CDRT1-205ENST00000475944 GOPCQ9HD26 462 aa13.03□□□□□ -0.32
CDRT1-205ENST00000475944 BAZ2AQ9UIF9 1905 aaKnown RBP13.02□□□□□ -0.32
CDRT1-205ENST00000475944 CYP2D7A0A087X1C5 515 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms