RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 GPAT2Q6NUI2 795 aa17.88■□□□□ 0.45
SNX13-207ENST00000475800 CNNM2Q9H8M5 875 aa17.88■□□□□ 0.45
SNX13-207ENST00000475800 ANO2Q9NQ90 1003 aa17.88■□□□□ 0.45
SNX13-207ENST00000475800 CPA4Q9UI42 421 aa17.88■□□□□ 0.45
SNX13-207ENST00000475800 TMX2Q9Y320 296 aa17.88■□□□□ 0.45
SNX13-207ENST00000475800 IGKV6D-41A0A0C4DH26 115 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 EEF2P13639 858 aaKnown RBP17.87■□□□□ 0.45
SNX13-207ENST00000475800 RRP12Q5JTH9 1297 aaKnown RBP17.87■□□□□ 0.45
SNX13-207ENST00000475800 TBC1D10CQ8IV04 446 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 SH3TC2Q8TF17 1288 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 LPAR1Q92633 364 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 ESR2Q92731 530 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.87■□□□□ 0.45
SNX13-207ENST00000475800 TMEM106CQ9BVX2 250 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 KRT23Q9C075 422 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 LSG1Q9H089 658 aaKnown RBP17.87■□□□□ 0.45
SNX13-207ENST00000475800 NBPF3Q9H094 633 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 MTMR4Q9NYA4 1195 aa17.87■□□□□ 0.45
SNX13-207ENST00000475800 BRCA2P51587 3418 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 TLR2O60603 784 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 TTLL1O95922 423 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 OSBPP22059 807 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 HOXA7P31268 230 aaPredicted RBP17.86■□□□□ 0.45
SNX13-207ENST00000475800 ATP2B2Q01814 1243 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 KIF22Q14807 665 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 FAM47AQ5JRC9 791 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 ARMC5Q96C12 935 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 CEP95Q96GE4 821 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 EMILIN3Q9NT22 766 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 TCP11L1Q9NUJ3 509 aa17.86■□□□□ 0.45
SNX13-207ENST00000475800 RBM8AQ9Y5S9 174 aaKnown RBP17.86■□□□□ 0.45
SNX13-207ENST00000475800 A0A1W2PRG0 241 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 REC8O95072 547 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 IRX3P78415 501 aaPredicted RBP17.85■□□□□ 0.45
SNX13-207ENST00000475800 TRDNQ13061 729 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 ARHGEF6Q15052 776 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 ZYXQ15942 572 aaKnown RBP17.85■□□□□ 0.45
SNX13-207ENST00000475800 CCDC178Q5BJE1 867 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 TREML2Q5T2D2 321 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 MKL1Q969V6 931 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 VCPKMTQ9H867 229 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 INCENPQ9NQS7 918 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 TACC3Q9Y6A5 838 aa17.85■□□□□ 0.45
SNX13-207ENST00000475800 EIF5BO60841 1220 aaKnown RBP17.84■□□□□ 0.45
SNX13-207ENST00000475800 CYP21A2P08686 494 aa17.84■□□□□ 0.45
SNX13-207ENST00000475800 VCAM1P19320 739 aa17.84■□□□□ 0.45
SNX13-207ENST00000475800 LACTBP83111 547 aaPredicted RBP17.84■□□□□ 0.45
SNX13-207ENST00000475800 RNF20Q5VTR2 975 aa17.84■□□□□ 0.45
SNX13-207ENST00000475800 IQCA1Q86XH1 822 aa17.84■□□□□ 0.45
SNX13-207ENST00000475800 CLEC10AQ8IUN9 316 aa17.84■□□□□ 0.45
SNX13-207ENST00000475800 GTF3C2Q8WUA4 911 aaPredicted RBP17.84■□□□□ 0.45
SNX13-207ENST00000475800 ZNF333Q96JL9 665 aa17.84■□□□□ 0.45
SNX13-207ENST00000475800 NEDD4P46934 1319 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L15C9J2P7 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L13C9JLJ4 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L11C9JVI0 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L18D6R9N7 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L22D6RA61 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L17D6RBQ6 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L19D6RCP7 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L20D6RJB6 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 EPB41L2O43491 1005 aaKnown RBP17.83■□□□□ 0.44
SNX13-207ENST00000475800 USP17L24Q0WX57 530 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 NBPF11Q86T75 865 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 SMCR8Q8TEV9 937 aaPredicted RBP17.83■□□□□ 0.44
SNX13-207ENST00000475800 CLIP2Q9UDT6 1046 aa17.83■□□□□ 0.44
SNX13-207ENST00000475800 WDR46O15213 610 aaKnown RBP17.82■□□□□ 0.44
SNX13-207ENST00000475800 CTGFP29279 349 aa17.82■□□□□ 0.44
SNX13-207ENST00000475800 PSMC4P43686 418 aa17.82■□□□□ 0.44
SNX13-207ENST00000475800 GCLCP48506 637 aaPredicted RBP17.82■□□□□ 0.44
SNX13-207ENST00000475800 TTC14Q96N46 770 aa17.82■□□□□ 0.44
SNX13-207ENST00000475800 ASCC2Q9H1I8 757 aaPredicted RBP17.82■□□□□ 0.44
SNX13-207ENST00000475800 STX8Q9UNK0 236 aa17.82■□□□□ 0.44
SNX13-207ENST00000475800 ADGRA2Q96PE1 1338 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 B4E1Z4 1266 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 KDM4AO75164 1064 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 FMNL1O95466 1100 aaPredicted RBP17.81■□□□□ 0.44
SNX13-207ENST00000475800 CYP2C8P10632 490 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 NOVP48745 357 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 NECTIN1Q15223 517 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 CATSPERGQ6ZRH7 1159 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
SNX13-207ENST00000475800 GMCL1P1Q8NEA9 526 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 NCOA7Q8NI08 942 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 RPAP3Q9H6T3 665 aaPredicted RBP17.81■□□□□ 0.44
SNX13-207ENST00000475800 IL17RBQ9NRM6 502 aa17.81■□□□□ 0.44
SNX13-207ENST00000475800 PARP14Q460N5 1801 aa17.8■□□□□ 0.44
SNX13-207ENST00000475800 E7EWF7 191 aa17.8■□□□□ 0.44
SNX13-207ENST00000475800 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
SNX13-207ENST00000475800 C17orf99Q6UX52 265 aa17.8■□□□□ 0.44
SNX13-207ENST00000475800 DGKHQ86XP1 1220 aa17.8■□□□□ 0.44
SNX13-207ENST00000475800 MYPNQ86TC9 1320 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 F5H6K3 240 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 SLC27A2O14975 620 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 RAD21O60216 631 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 NMT2O60551 498 aa17.79■□□□□ 0.44
SNX13-207ENST00000475800 TOP1P11387 765 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms