RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 HOXD10P28358 340 aa17.12■□□□□ 0.33
ABCF3-211ENST00000475728 HERVK_113P62684 666 aa17.12■□□□□ 0.33
ABCF3-211ENST00000475728 TFAP4Q01664 338 aa17.12■□□□□ 0.33
ABCF3-211ENST00000475728 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
ABCF3-211ENST00000475728 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.12■□□□□ 0.33
ABCF3-211ENST00000475728 VCPKMTQ9H867 229 aa17.12■□□□□ 0.33
ABCF3-211ENST00000475728 MYH8P13535 1937 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 TSPY2A6NKD2 308 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 WDR46O15213 610 aaKnown RBP17.11■□□□□ 0.33
ABCF3-211ENST00000475728 TTLL1O95922 423 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 FGRP09769 529 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 FCGRTP55899 365 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 IMMTQ16891 758 aaKnown RBP17.11■□□□□ 0.33
ABCF3-211ENST00000475728 CATSPERGQ6ZRH7 1159 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 MFSD6Q6ZSS7 791 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 SIAH1Q8IUQ4 282 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 P2RX7Q99572 595 aaKnown RBP17.11■□□□□ 0.33
ABCF3-211ENST00000475728 RPAP3Q9H6T3 665 aaPredicted RBP17.11■□□□□ 0.33
ABCF3-211ENST00000475728 TOMM22Q9NS69 142 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 MTMR4Q9NYA4 1195 aa17.11■□□□□ 0.33
ABCF3-211ENST00000475728 IGKV6D-41A0A0C4DH26 115 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 RANBP6O60518 1105 aaKnown RBP17.1■□□□□ 0.33
ABCF3-211ENST00000475728 FMNL1O95466 1100 aaPredicted RBP17.1■□□□□ 0.33
ABCF3-211ENST00000475728 PSMC4P43686 418 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 AKNAD1Q5T1N1 836 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 CLEC10AQ8IUN9 316 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 ANKRD13CQ8N6S4 541 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 STAG1Q8WVM7 1258 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 TANGO6Q9C0B7 1094 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 HOXC10Q9NYD6 342 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 MORF4L1Q9UBU8 362 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 CLIP2Q9UDT6 1046 aa17.1■□□□□ 0.33
ABCF3-211ENST00000475728 SGSM2O43147 1006 aa17.09■□□□□ 0.33
ABCF3-211ENST00000475728 HAND2P61296 217 aa17.09■□□□□ 0.33
ABCF3-211ENST00000475728 FAM47AQ5JRC9 791 aa17.09■□□□□ 0.33
ABCF3-211ENST00000475728 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
ABCF3-211ENST00000475728 MKL1Q969V6 931 aa17.09■□□□□ 0.33
ABCF3-211ENST00000475728 CEP95Q96GE4 821 aa17.09■□□□□ 0.33
ABCF3-211ENST00000475728 PTPN22Q9Y2R2 807 aa17.09■□□□□ 0.33
ABCF3-211ENST00000475728 RABGAP1Q9Y3P9 1069 aa17.09■□□□□ 0.33
ABCF3-211ENST00000475728 MYPNQ86TC9 1320 aa17.08■□□□□ 0.32
ABCF3-211ENST00000475728 RAD21O60216 631 aa17.08■□□□□ 0.32
ABCF3-211ENST00000475728 COG2Q14746 738 aa17.08■□□□□ 0.32
ABCF3-211ENST00000475728 LBX2Q6XYB7 198 aa17.08■□□□□ 0.32
ABCF3-211ENST00000475728 KIAA1211Q6ZU35 1233 aa17.08■□□□□ 0.32
ABCF3-211ENST00000475728 GPRC5AQ8NFJ5 357 aa17.08■□□□□ 0.32
ABCF3-211ENST00000475728 ESR2Q92731 530 aa17.08■□□□□ 0.32
ABCF3-211ENST00000475728 U3KPZ7 1027 aaPredicted RBP17.08■□□□□ 0.32
ABCF3-211ENST00000475728 CCNA1P78396 465 aa17.07■□□□□ 0.32
ABCF3-211ENST00000475728 RRP12Q5JTH9 1297 aaKnown RBP17.07■□□□□ 0.32
ABCF3-211ENST00000475728 CCAR1Q8IX12 1150 aaKnown RBP17.07■□□□□ 0.32
ABCF3-211ENST00000475728 SPICE1Q8N0Z3 855 aa17.07■□□□□ 0.32
ABCF3-211ENST00000475728 MB21D1Q8N884 522 aa17.07■□□□□ 0.32
ABCF3-211ENST00000475728 COA7Q96BR5 231 aa17.07■□□□□ 0.32
ABCF3-211ENST00000475728 TRIM47Q96LD4 638 aa17.07■□□□□ 0.32
ABCF3-211ENST00000475728 ARHGAP39Q9C0H5 1083 aa17.07■□□□□ 0.32
ABCF3-211ENST00000475728 F5H6K3 240 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 TNPO2O14787 897 aaKnown RBP17.06■□□□□ 0.32
ABCF3-211ENST00000475728 FLOT1O75955 427 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 ERVK-9P63128 1117 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 ERVK-24P63145 666 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 KLRC3Q07444 240 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 CCDC178Q5BJE1 867 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 GMCL1P1Q8NEA9 526 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 PAGR1Q9BTK6 254 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 CNNM2Q9H8M5 875 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 TCP11L1Q9NUJ3 509 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 RBPJLQ9UBG7 517 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 SRRDQ9UH36 339 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 STX8Q9UNK0 236 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 HPS5Q9UPZ3 1129 aa17.06■□□□□ 0.32
ABCF3-211ENST00000475728 GREB1LQ9C091 1923 aaPredicted RBP17.06■□□□□ 0.32
ABCF3-211ENST00000475728 SPDYE16A6NNV3 312 aaPredicted RBP17.05■□□□□ 0.32
ABCF3-211ENST00000475728 MAPK4P31152 587 aa17.05■□□□□ 0.32
ABCF3-211ENST00000475728 ESYT1Q9BSJ8 1104 aa17.05■□□□□ 0.32
ABCF3-211ENST00000475728 KRT23Q9C075 422 aa17.05■□□□□ 0.32
ABCF3-211ENST00000475728 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
ABCF3-211ENST00000475728 IL25Q9H293 177 aa17.05■□□□□ 0.32
ABCF3-211ENST00000475728 INCENPQ9NQS7 918 aa17.05■□□□□ 0.32
ABCF3-211ENST00000475728 CDC45O75419 566 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 NDUFB10O96000 172 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 DSG3P32926 999 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 KIAA1755Q5JYT7 1200 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 NBPF11Q86T75 865 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 SKAP1Q86WV1 359 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 RAET1EQ8TD07 263 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 TTC14Q96N46 770 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 CWC22Q9HCG8 908 aaKnown RBP17.04■□□□□ 0.32
ABCF3-211ENST00000475728 TACC3Q9Y6A5 838 aa17.04■□□□□ 0.32
ABCF3-211ENST00000475728 CTGFP29279 349 aa17.03■□□□□ 0.32
ABCF3-211ENST00000475728 NOVP48745 357 aa17.03■□□□□ 0.32
ABCF3-211ENST00000475728 CAP1Q01518 475 aa17.03■□□□□ 0.32
ABCF3-211ENST00000475728 PTH1RQ03431 593 aa17.03■□□□□ 0.32
ABCF3-211ENST00000475728 TRDNQ13061 729 aa17.03■□□□□ 0.32
ABCF3-211ENST00000475728 FAM83BQ5T0W9 1011 aa17.03■□□□□ 0.32
ABCF3-211ENST00000475728 SLFN13Q68D06 897 aa17.03■□□□□ 0.32
ABCF3-211ENST00000475728 LRRC47Q8N1G4 583 aaKnown RBP17.03■□□□□ 0.32
ABCF3-211ENST00000475728 MAP4K1Q92918 833 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms