RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 TTC19Q6DKK2 380 aaPredicted RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 EIF3CQ99613 913 aaKnown RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 CSF1RP07333 972 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 MYBL2P10244 700 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 COPB1P53618 953 aaKnown RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 PPARDQ03181 441 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 PTGDRQ13258 359 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 ZBTB38Q8NAP3 1195 aaPredicted RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 MTRQ99707 1265 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 UBAC1Q9BSL1 405 aa15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 TRMT112Q9UI30 125 aaKnown RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 TTF2Q9UNY4 1162 aaKnown RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 PHRF1Q9P1Y6 1649 aaKnown RBP15.49■□□□□ 0.07
SEMA4D-217ENST00000475255 IRS4O14654 1257 aaPredicted RBP15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 TTF1Q15361 905 aaPredicted RBP15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 KANK3Q6NY19 840 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 KIF6Q6ZMV9 814 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 SPATA5Q8NB90 893 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 DUSP10Q9Y6W6 482 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 STK36Q9NRP7 1315 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 MCM7P33993 719 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 NELFBQ8WX92 580 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 DRC1Q96MC2 740 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 NAA15Q9BXJ9 866 aaKnown RBP15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 AKAP11Q9UKA4 1901 aa15.48■□□□□ 0.07
SEMA4D-217ENST00000475255 TTC26A0AVF1 554 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 BCAMP50895 628 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 SART3Q15020 963 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 TMTC1Q8IUR5 882 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 VGLL2Q8N8G2 317 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 PSMB7Q99436 277 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 KCNJ18B7U540 433 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 SYF2O95926 243 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 AMPD2Q01433 879 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 KCNJ12Q14500 433 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 DNAJC21Q5F1R6 531 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 CYP26C1Q6V0L0 522 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 ZNF579Q8NAF0 562 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 CEP131Q9UPN4 1083 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 EPN1Q9Y6I3 576 aaPredicted RBP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 TNKSO95271 1327 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 WTIPA6NIX2 430 aaPredicted RBP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 POTEB2H3BUK9 544 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 NOP2P46087 812 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 KLK7P49862 253 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 CTSWP56202 376 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 CYP27A1Q02318 531 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 PPARAQ07869 468 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 PKN1Q16512 942 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 GOLGA6L1Q8N7Z2 621 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 CCDC148Q8NFR7 591 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 GNL3LQ9NVN8 582 aaKnown RBP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 AATFQ9NY61 560 aaKnown RBP eCLIP15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 ABCF2Q9UG63 623 aa15.47■□□□□ 0.07
SEMA4D-217ENST00000475255 NDUFA10O95299 355 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 PMS1P54277 932 aaKnown RBP15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 PIP4K2BP78356 416 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 WHAMMP3Q1A5X7 153 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 CCDC122Q5T0U0 273 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 SH3RF1Q7Z6J0 888 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 TICAM2Q86XR7 235 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 FAM71BQ8TC56 605 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 MACROD2A1Z1Q3 448 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 RCCD1A6NED2 376 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 MATR3P43243 847 aaKnown RBP eCLIP15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 MAP3K12Q12852 859 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 PIK3AP1Q6ZUJ8 805 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 PAXIP1Q6ZW49 1069 aaPredicted RBP15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 ADGRA1Q86SQ6 560 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 NLRP10Q86W26 655 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 CTAGE1Q96RT6 745 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 KRT23Q9C075 422 aa15.46■□□□□ 0.07
SEMA4D-217ENST00000475255 PLEKHG2Q9H7P9 1386 aa15.46■□□□□ 0.06
SEMA4D-217ENST00000475255 IVLP07476 585 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 KRT2P35908 639 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 GGCXP38435 758 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 GTF2A1P52655 376 aaPredicted RBP15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 CAGE1Q8TC20 777 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 SMCR8Q8TEV9 937 aaPredicted RBP15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 LACRTQ9GZZ8 138 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 SMARCAL1Q9NZC9 954 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 MYH7P12883 1935 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 GLI3P10071 1580 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 PP2D1A8MPX8 630 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 PDE2AO00408 941 aaPredicted RBP15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 NMT2O60551 498 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 ERCC3P19447 782 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 C2orf54Q08AI8 447 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 EZH2Q15910 746 aaKnown RBP15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 TCP11X2Q5H9J9 407 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 TTC38Q5R3I4 469 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 LRP2BPQ9P2M1 347 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 MTMR7Q9Y216 660 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 SPATA31A3Q5VYP0 1347 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 SPEF2Q9C093 1822 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 PRCPP42785 496 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 HERVK_113P62684 666 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 PAK1Q13153 545 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 E2F4Q16254 413 aa15.45■□□□□ 0.06
SEMA4D-217ENST00000475255 IL17AQ16552 155 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms