RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 CERS5Q8N5B7 392 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 ZNF713Q8N859 430 aaPredicted RBP24.96■■□□□ 1.59
CCM2-206ENST00000474617 PYM1Q9BRP8 204 aaKnown RBP24.96■■□□□ 1.59
CCM2-206ENST00000474617 ZKSCAN5Q9Y2L8 839 aa24.96■■□□□ 1.59
CCM2-206ENST00000474617 NLRP5P59047 1200 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 NR5A1Q13285 461 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 SHC4Q6S5L8 630 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 DAGLBQ8NCG7 672 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 TNFRSF25Q93038 417 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 FBXW7Q969H0 707 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 DHX36Q9H2U1 1008 aaKnown RBP24.95■■□□□ 1.58
CCM2-206ENST00000474617 CABP5Q9NP86 173 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 MAD2L2Q9UI95 211 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 FBXO2Q9UK22 296 aaPredicted RBP24.95■■□□□ 1.58
CCM2-206ENST00000474617 STX8Q9UNK0 236 aa24.95■■□□□ 1.58
CCM2-206ENST00000474617 MSL1Q68DK7 614 aa24.94■■□□□ 1.58
CCM2-206ENST00000474617 SARM1Q6SZW1 724 aa24.94■■□□□ 1.58
CCM2-206ENST00000474617 SLC16A10Q8TF71 515 aa24.94■■□□□ 1.58
CCM2-206ENST00000474617 DNAJC25Q9H1X3 360 aa24.94■■□□□ 1.58
CCM2-206ENST00000474617 USP40Q9NVE5 1235 aa24.94■■□□□ 1.58
CCM2-206ENST00000474617 KCNH3Q9ULD8 1083 aa24.94■■□□□ 1.58
CCM2-206ENST00000474617 USP17L3A6NCW0 530 aa24.93■■□□□ 1.58
CCM2-206ENST00000474617 USP17L4A6NCW7 530 aa24.93■■□□□ 1.58
CCM2-206ENST00000474617 USP17L1Q7RTZ2 530 aa24.93■■□□□ 1.58
CCM2-206ENST00000474617 CCDC17Q96LX7 622 aa24.93■■□□□ 1.58
CCM2-206ENST00000474617 RRAGDQ9NQL2 400 aaPredicted RBP24.93■■□□□ 1.58
CCM2-206ENST00000474617 SERPINB13Q9UIV8 391 aa24.93■■□□□ 1.58
CCM2-206ENST00000474617 SERPINA10Q9UK55 444 aa24.93■■□□□ 1.58
CCM2-206ENST00000474617 PARP1P09874 1014 aaKnown RBP24.92■■□□□ 1.58
CCM2-206ENST00000474617 SF3B2Q13435 895 aaKnown RBP24.92■■□□□ 1.58
CCM2-206ENST00000474617 DOK7Q18PE1 504 aa24.92■■□□□ 1.58
CCM2-206ENST00000474617 C7orf43Q8WVR3 580 aa24.92■■□□□ 1.58
CCM2-206ENST00000474617 OSBPL5Q9H0X9 879 aaPredicted RBP24.92■■□□□ 1.58
CCM2-206ENST00000474617 VPS33BQ9H267 617 aa24.92■■□□□ 1.58
CCM2-206ENST00000474617 BECN2A8MW95 431 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 CDC25BP30305 580 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 BAG6P46379 1132 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 TPM4P67936 248 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 KIAA2012Q0VF49 1180 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 IQCB1Q15051 598 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 EZH2Q15910 746 aaKnown RBP24.91■■□□□ 1.58
CCM2-206ENST00000474617 LUZP1Q86V48 1076 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 SLC44A5Q8NCS7 719 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 OXER1Q8TDS5 423 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 ANO8Q9HCE9 1232 aaPredicted RBP24.91■■□□□ 1.58
CCM2-206ENST00000474617 RGS17Q9UGC6 210 aaPredicted RBP24.91■■□□□ 1.58
CCM2-206ENST00000474617 TUBE1Q9UJT0 475 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 CRKP46108 304 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 NLRP12P59046 1061 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 NPY5RQ15761 445 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 ASPRV1Q53RT3 343 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 DACT2Q5SW24 774 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 PCDHA4Q9UN74 947 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 PCDHB6Q9Y5E3 794 aa24.91■■□□□ 1.58
CCM2-206ENST00000474617 MYO1BO43795 1136 aa24.9■■□□□ 1.58
CCM2-206ENST00000474617 ZNF500O60304 480 aaPredicted RBP24.9■■□□□ 1.58
CCM2-206ENST00000474617 ECE2O60344 883 aa24.9■■□□□ 1.58
CCM2-206ENST00000474617 APOBEC3HQ6NTF7 200 aaKnown RBP24.9■■□□□ 1.58
CCM2-206ENST00000474617 KRBA2Q6ZNG9 492 aa24.9■■□□□ 1.58
CCM2-206ENST00000474617 BLIDQ8IZY5 108 aa24.9■■□□□ 1.58
CCM2-206ENST00000474617 IDI2Q9BXS1 227 aa24.9■■□□□ 1.58
CCM2-206ENST00000474617 BARHL2Q9NY43 387 aa24.9■■□□□ 1.58
CCM2-206ENST00000474617 COL2A1P02458 1487 aaPredicted RBP24.89■■□□□ 1.57
CCM2-206ENST00000474617 IGKV6D-41A0A0C4DH26 115 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 SMTNL1A8MU46 457 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 TTC38Q5R3I4 469 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 ARL6IP4Q66PJ3 421 aaKnown RBP24.89■■□□□ 1.57
CCM2-206ENST00000474617 CDC42EP5Q6NZY7 148 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 POTEAQ6S8J7 498 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 RTKN2Q8IZC4 609 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 CNNM3Q8NE01 707 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 MTMR4Q9NYA4 1195 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 SLX4Q8IY92 1834 aa24.89■■□□□ 1.57
CCM2-206ENST00000474617 KLRF2D3W0D1 207 aa24.88■■□□□ 1.57
CCM2-206ENST00000474617 EN1Q05925 392 aaPredicted RBP24.88■■□□□ 1.57
CCM2-206ENST00000474617 SLC4A8Q2Y0W8 1093 aa24.88■■□□□ 1.57
CCM2-206ENST00000474617 SHISA4Q96DD7 197 aa24.88■■□□□ 1.57
CCM2-206ENST00000474617 CEP95Q96GE4 821 aa24.88■■□□□ 1.57
CCM2-206ENST00000474617 ATP2C1P98194 919 aaPredicted RBP24.87■■□□□ 1.57
CCM2-206ENST00000474617 ORC2Q13416 577 aaPredicted RBP24.87■■□□□ 1.57
CCM2-206ENST00000474617 RRP36Q96EU6 259 aaKnown RBP24.87■■□□□ 1.57
CCM2-206ENST00000474617 SEC63Q9UGP8 760 aaKnown RBP24.87■■□□□ 1.57
CCM2-206ENST00000474617 LAD1O00515 517 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 TTLL1O95922 423 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 GNA11P29992 359 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 PICALMQ13492 652 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 DHX8Q14562 1220 aaKnown RBP24.86■■□□□ 1.57
CCM2-206ENST00000474617 CT47A1Q5JQC4 288 aaPredicted RBP24.86■■□□□ 1.57
CCM2-206ENST00000474617 SOGA3Q5TF21 947 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 OLFM4Q6UX06 510 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 PLA2G4DQ86XP0 818 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 TRIML1Q8N9V2 468 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 MYH8P13535 1937 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 ESYT2A0FGR8 921 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 F8W031 263 aaPredicted RBP24.86■■□□□ 1.57
CCM2-206ENST00000474617 IKBKBO14920 756 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 PLCB2Q00722 1185 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 STAG2Q8N3U4 1231 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 MRFAP1L1Q96HT8 127 aa24.86■■□□□ 1.57
CCM2-206ENST00000474617 CLIC6Q96NY7 704 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms