RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 ADGRE1Q14246 886 aa9.32□□□□□ -0.92
VPS50-211ENST00000474412 SETDB1Q15047 1291 aa9.32□□□□□ -0.92
VPS50-211ENST00000474412 IGF2-ASQ6U949 168 aa9.32□□□□□ -0.92
VPS50-211ENST00000474412 HHIPQ96QV1 700 aa9.32□□□□□ -0.92
VPS50-211ENST00000474412 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
VPS50-211ENST00000474412 LATS2Q9NRM7 1088 aa9.32□□□□□ -0.92
VPS50-211ENST00000474412 UTRNP46939 3433 aa9.32□□□□□ -0.92
VPS50-211ENST00000474412 DLL1O00548 723 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 RNMTO43148 476 aaKnown RBP9.31□□□□□ -0.92
VPS50-211ENST00000474412 EPHA1P21709 976 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 SLC39A6Q13433 755 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 DOC2BQ14184 412 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 AKAP4Q5JQC9 854 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 ADAMTSL4Q6UY14 1074 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 TXNRD3Q86VQ6 643 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 TMEM102Q8N9M5 508 aaPredicted RBP9.31□□□□□ -0.92
VPS50-211ENST00000474412 PXDNLA1KZ92 1463 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 C10orf71Q711Q0 1435 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 CNTNAP4Q9C0A0 1308 aa9.31□□□□□ -0.92
VPS50-211ENST00000474412 TNRC6CQ9HCJ0 1690 aaKnown RBP9.3□□□□□ -0.92
VPS50-211ENST00000474412 NFKBIEO00221 500 aa9.3□□□□□ -0.92
VPS50-211ENST00000474412 POLD1P28340 1107 aa9.3□□□□□ -0.92
VPS50-211ENST00000474412 PRKAR2BP31323 418 aa9.3□□□□□ -0.92
VPS50-211ENST00000474412 ORC1Q13415 861 aa9.3□□□□□ -0.92
VPS50-211ENST00000474412 ADAM19Q9H013 955 aa9.3□□□□□ -0.92
VPS50-211ENST00000474412 SLC52A2Q9HAB3 445 aa9.3□□□□□ -0.92
VPS50-211ENST00000474412 DCTN4Q9UJW0 460 aa9.3□□□□□ -0.92
VPS50-211ENST00000474412 WWC3Q9ULE0 1092 aa9.3□□□□□ -0.92
VPS50-211ENST00000474412 GOLGB1Q14789 3259 aaKnown RBP9.29□□□□□ -0.92
VPS50-211ENST00000474412 H3BRJ5 948 aa9.29□□□□□ -0.92
VPS50-211ENST00000474412 GPR182O15218 404 aa9.29□□□□□ -0.92
VPS50-211ENST00000474412 FURINP09958 794 aa9.29□□□□□ -0.92
VPS50-211ENST00000474412 YBX3P16989 372 aaKnown RBP eCLIP9.29□□□□□ -0.92
VPS50-211ENST00000474412 CRKLP46109 303 aaKnown RBP9.29□□□□□ -0.92
VPS50-211ENST00000474412 DNAJC10Q8IXB1 793 aa9.29□□□□□ -0.92
VPS50-211ENST00000474412 PHACTR3Q96KR7 559 aa9.29□□□□□ -0.92
VPS50-211ENST00000474412 DMRTB1Q96MA1 342 aa9.29□□□□□ -0.92
VPS50-211ENST00000474412 RBCK1Q9BYM8 510 aa9.29□□□□□ -0.92
VPS50-211ENST00000474412 MRPL18Q9H0U6 180 aaKnown RBP9.29□□□□□ -0.92
VPS50-211ENST00000474412 LAMB2P55268 1798 aa9.29□□□□□ -0.92
VPS50-211ENST00000474412 CEMIPQ8WUJ3 1361 aa9.28□□□□□ -0.92
VPS50-211ENST00000474412 PATL2C9JE40 543 aaKnown RBP9.28□□□□□ -0.92
VPS50-211ENST00000474412 FSCN2O14926 492 aa9.28□□□□□ -0.92
VPS50-211ENST00000474412 CPNE3O75131 537 aaKnown RBP9.28□□□□□ -0.92
VPS50-211ENST00000474412 YY1P25490 414 aa9.28□□□□□ -0.92
VPS50-211ENST00000474412 MAPK1P28482 360 aa9.28□□□□□ -0.92
VPS50-211ENST00000474412 PEAR1Q5VY43 1037 aaPredicted RBP9.28□□□□□ -0.92
VPS50-211ENST00000474412 USPL1Q5W0Q7 1092 aa9.28□□□□□ -0.92
VPS50-211ENST00000474412 ASAP3Q8TDY4 903 aa9.28□□□□□ -0.92
VPS50-211ENST00000474412 NXPE3Q969Y0 559 aa9.28□□□□□ -0.92
VPS50-211ENST00000474412 NIF3L1Q9GZT8 377 aa9.28□□□□□ -0.92
VPS50-211ENST00000474412 SRP68Q9UHB9 627 aaKnown RBP9.28□□□□□ -0.92
VPS50-211ENST00000474412 COL15A1P39059 1388 aa9.27□□□□□ -0.93
VPS50-211ENST00000474412 CD68P34810 354 aaPredicted RBP9.27□□□□□ -0.93
VPS50-211ENST00000474412 GALNT12Q8IXK2 581 aa9.27□□□□□ -0.93
VPS50-211ENST00000474412 GALNT11Q8NCW6 608 aa9.27□□□□□ -0.93
VPS50-211ENST00000474412 IL17REQ8NFR9 667 aa9.27□□□□□ -0.93
VPS50-211ENST00000474412 BSNDQ8WZ55 320 aa9.27□□□□□ -0.93
VPS50-211ENST00000474412 TPSG1Q9NRR2 321 aa9.27□□□□□ -0.93
VPS50-211ENST00000474412 ZBTB1Q9Y2K1 713 aa9.27□□□□□ -0.93
VPS50-211ENST00000474412 DICER1Q9UPY3 1922 aaKnown RBP9.27□□□□□ -0.93
VPS50-211ENST00000474412 FER1L6Q2WGJ9 1857 aa9.26□□□□□ -0.93
VPS50-211ENST00000474412 KCNQ3O43525 872 aa9.26□□□□□ -0.93
VPS50-211ENST00000474412 PDIA4P13667 645 aaKnown RBP9.26□□□□□ -0.93
VPS50-211ENST00000474412 IREB2P48200 963 aaKnown RBP9.26□□□□□ -0.93
VPS50-211ENST00000474412 INTS5Q6P9B9 1019 aaKnown RBP9.26□□□□□ -0.93
VPS50-211ENST00000474412 KLHL23Q8NBE8 558 aa9.26□□□□□ -0.93
VPS50-211ENST00000474412 FLAD1Q8NFF5 587 aa9.26□□□□□ -0.93
VPS50-211ENST00000474412 WFDC12Q8WWY7 111 aa9.26□□□□□ -0.93
VPS50-211ENST00000474412 SLC7A3Q8WY07 619 aa9.26□□□□□ -0.93
VPS50-211ENST00000474412 CFAP53Q96M91 514 aa9.26□□□□□ -0.93
VPS50-211ENST00000474412 SEC31BQ9NQW1 1179 aa9.26□□□□□ -0.93
VPS50-211ENST00000474412 SOS1Q07889 1333 aaPredicted RBP9.26□□□□□ -0.93
VPS50-211ENST00000474412 USP42Q9H9J4 1324 aaKnown RBP9.26□□□□□ -0.93
VPS50-211ENST00000474412 CARMIL3Q8ND23 1372 aa9.25□□□□□ -0.93
VPS50-211ENST00000474412 HEG1Q9ULI3 1381 aa9.25□□□□□ -0.93
VPS50-211ENST00000474412 K7ELQ4 463 aaPredicted RBP9.25□□□□□ -0.93
VPS50-211ENST00000474412 EIF1AYO14602 144 aaKnown RBP9.25□□□□□ -0.93
VPS50-211ENST00000474412 RPS6KA4O75676 772 aa9.25□□□□□ -0.93
VPS50-211ENST00000474412 MMP10P09238 476 aa9.25□□□□□ -0.93
VPS50-211ENST00000474412 U2AF1L5P0DN76 240 aaPredicted RBP9.25□□□□□ -0.93
VPS50-211ENST00000474412 GYS1P13807 737 aa9.25□□□□□ -0.93
VPS50-211ENST00000474412 U2AF1Q01081 240 aaKnown RBP eCLIP9.25□□□□□ -0.93
VPS50-211ENST00000474412 DCTN1Q14203 1278 aa9.25□□□□□ -0.93
VPS50-211ENST00000474412 FOXD4L6Q3SYB3 417 aaPredicted RBP9.25□□□□□ -0.93
VPS50-211ENST00000474412 FOXD4L3Q6VB84 417 aaPredicted RBP9.25□□□□□ -0.93
VPS50-211ENST00000474412 BHLHE41Q9C0J9 482 aaPredicted RBP9.25□□□□□ -0.93
VPS50-211ENST00000474412 SOX13Q9UN79 622 aa9.25□□□□□ -0.93
VPS50-211ENST00000474412 A0A1W2PP55 124 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 PRAMEF22A3QJZ6 481 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 GNAT3A8MTJ3 354 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 IGHA2P01877 340 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 CYP19A1P11511 503 aaPredicted RBP9.24□□□□□ -0.93
VPS50-211ENST00000474412 NOS3P29474 1203 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 ARL4DP49703 201 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 DDR1Q08345 913 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 DDX10Q13206 875 aaKnown RBP9.24□□□□□ -0.93
VPS50-211ENST00000474412 GPR162Q16538 588 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 MCM10Q7L590 875 aa9.24□□□□□ -0.93
VPS50-211ENST00000474412 TMC7Q7Z402 723 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms