RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 YARSP54577 528 aaKnown RBP6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 LINC00310P59036 64 aa6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 CAMK2GQ13555 558 aaPredicted RBP6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 AMIGO3Q86WK7 504 aa6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 SLC26A8Q96RN1 970 aa6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 SGPP1Q9BX95 441 aa6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 MCOLN1Q9GZU1 580 aa6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 REV1Q9UBZ9 1251 aa6.54□□□□□ -1.36
TMEM50B-208ENST00000474272 DNAJA2O60884 412 aa6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 BPNT1O95861 308 aa6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 DAB2P98082 770 aa6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 FAM160A1Q05DH4 1040 aa6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 SIRT2Q8IXJ6 389 aa6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 KREMEN1Q96MU8 473 aa6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 NOC4LQ9BVI4 516 aaKnown RBP6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 GPR160Q9UJ42 338 aa6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 POLR3KQ9Y2Y1 108 aaPredicted RBP6.53□□□□□ -1.36
TMEM50B-208ENST00000474272 PSPNO60542 156 aa6.52□□□□□ -1.37
TMEM50B-208ENST00000474272 RLBP1P12271 317 aa6.52□□□□□ -1.37
TMEM50B-208ENST00000474272 PDE6BP35913 854 aa6.52□□□□□ -1.37
TMEM50B-208ENST00000474272 TMEM201Q5SNT2 666 aa6.52□□□□□ -1.37
TMEM50B-208ENST00000474272 OXR1Q8N573 874 aa6.52□□□□□ -1.37
TMEM50B-208ENST00000474272 FBXO27Q8NI29 283 aa6.52□□□□□ -1.37
TMEM50B-208ENST00000474272 RNF141Q8WVD5 230 aa6.52□□□□□ -1.37
TMEM50B-208ENST00000474272 KIF2CQ99661 725 aa6.52□□□□□ -1.37
TMEM50B-208ENST00000474272 MINDY4BA8MYZ0 360 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 EFEMP2O95967 443 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 DLG4P78352 724 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 TAGLNQ01995 201 aaKnown RBP6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 TEKQ02763 1124 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 LMNB2Q03252 620 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 TMEM132EQ6IEE7 984 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 SLFN12Q8IYM2 578 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 GATAD2BQ8WXI9 593 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 INTS4Q96HW7 963 aaKnown RBP6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 KRTAP4-11Q9BYQ6 195 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 SLC6A17Q9H1V8 727 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 YBX2Q9Y2T7 364 aaKnown RBP6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 USP31Q70CQ4 1352 aa6.51□□□□□ -1.37
TMEM50B-208ENST00000474272 FITM1A5D6W6 292 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 B8ZZF3 427 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 PRRG2O14669 202 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 HTR3BO95264 441 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 GBP2P32456 591 aaPredicted RBP6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 BUD31P41223 144 aaPredicted RBP6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 ST13P50502 369 aaKnown RBP6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 XPCQ01831 940 aaPredicted RBP6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 CLEC16AQ2KHT3 1053 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 PHACTR4Q8IZ21 702 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 LILRA2Q8N149 483 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 DHX38Q92620 1227 aaKnown RBP6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 CCDC74BQ96LY2 380 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 NCANO14594 1321 aa6.5□□□□□ -1.37
TMEM50B-208ENST00000474272 NOTOA8MTQ0 251 aa6.49□□□□□ -1.37
TMEM50B-208ENST00000474272 TLR3O15455 904 aaKnown RBP6.49□□□□□ -1.37
TMEM50B-208ENST00000474272 CCDC84Q86UT8 332 aaPredicted RBP6.49□□□□□ -1.37
TMEM50B-208ENST00000474272 IRF2BP1Q8IU81 584 aa6.49□□□□□ -1.37
TMEM50B-208ENST00000474272 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
TMEM50B-208ENST00000474272 SHISA4Q96DD7 197 aa6.49□□□□□ -1.37
TMEM50B-208ENST00000474272 C20orf173Q96LM9 149 aa6.49□□□□□ -1.37
TMEM50B-208ENST00000474272 GCM1Q9NP62 436 aa6.49□□□□□ -1.37
TMEM50B-208ENST00000474272 RBM47A0AV96 593 aaKnown RBP6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 BMP7P18075 431 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 HOXA5P20719 270 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 RPL10P27635 214 aaKnown RBP6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 GBP1P32455 592 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 CTSWP56202 376 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 NR0B2Q15466 257 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 SPPL2CQ8IUH8 684 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 RELL1Q8IUW5 271 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 GOLM1Q8NBJ4 401 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 RHOVQ96L33 236 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 TMEM74Q96NL1 305 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 G6PC3Q9BUM1 346 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 ZNF552Q9H707 407 aaPredicted RBP6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 PRR36Q9H6K5 1346 aa6.48□□□□□ -1.37
TMEM50B-208ENST00000474272 USP2O75604 605 aaPredicted RBP6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 SDHBP21912 280 aa6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 TRIM26Q12899 539 aaPredicted RBP6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 DIEXFQ68CQ4 756 aaKnown RBP6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 ZPBP2Q6X784 338 aa6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 SND1Q7KZF4 910 aaKnown RBP eCLIP6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 TMC4Q7Z404 712 aa6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 USHBP1Q8N6Y0 703 aa6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 LINC01599Q8WXQ3 324 aa6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 VWCEQ96DN2 955 aa6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 CNOT6Q9ULM6 557 aaKnown RBP6.47□□□□□ -1.37
TMEM50B-208ENST00000474272 NMIQ13287 307 aaPredicted RBP6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 SSPNQ14714 243 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 ARSHQ5FYA8 562 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 SNAP47Q5SQN1 464 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 ADGRF1Q5T601 910 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 WAPLQ7Z5K2 1190 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 TMC3Q7Z5M5 1100 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 AEBP1Q8IUX7 1158 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 PANK1Q8TE04 598 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 ASPNQ9BXN1 380 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 FOXP3Q9BZS1 431 aa6.46□□□□□ -1.38
TMEM50B-208ENST00000474272 ZMYM5Q9UJ78 669 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms