RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 SLC6A19Q695T7 634 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 C12orf40Q86WS4 652 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 HID1Q8IV36 788 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 MCATQ8IVS2 390 aaKnown RBP6.01□□□□□ -1.45
BRCA1-212ENST00000473961 SLFN12Q8IYM2 578 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 SMARCC1Q92922 1105 aaPredicted RBP6.01□□□□□ -1.45
BRCA1-212ENST00000473961 IPO9Q96P70 1041 aaKnown RBP6.01□□□□□ -1.45
BRCA1-212ENST00000473961 SLC26A8Q96RN1 970 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 RUSC1Q9BVN2 902 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 RNF208Q9H0X6 261 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 ANTXR1Q9H6X2 564 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 HIF3AQ9Y2N7 669 aa6.01□□□□□ -1.45
BRCA1-212ENST00000473961 NOP58Q9Y2X3 529 aaKnown RBP6.01□□□□□ -1.45
BRCA1-212ENST00000473961 GBP1P32455 592 aa6□□□□□ -1.45
BRCA1-212ENST00000473961 GNPTABQ3T906 1256 aa6□□□□□ -1.45
BRCA1-212ENST00000473961 AKAP4Q5JQC9 854 aa6□□□□□ -1.45
BRCA1-212ENST00000473961 MRPL41Q8IXM3 137 aaKnown RBP6□□□□□ -1.45
BRCA1-212ENST00000473961 LILRB2Q8N423 598 aa6□□□□□ -1.45
BRCA1-212ENST00000473961 RNF214Q8ND24 703 aa6□□□□□ -1.45
BRCA1-212ENST00000473961 UTP4Q969X6 686 aaKnown RBP6□□□□□ -1.45
BRCA1-212ENST00000473961 PIDD1Q9HB75 910 aa6□□□□□ -1.45
BRCA1-212ENST00000473961 ANGEL1Q9UNK9 670 aaKnown RBP6□□□□□ -1.45
BRCA1-212ENST00000473961 PLAAQ9Y263 795 aa6□□□□□ -1.45
BRCA1-212ENST00000473961 CSADQ9Y600 493 aa6□□□□□ -1.45
BRCA1-212ENST00000473961 ESYT3A0FGR9 886 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 MEGF11A6BM72 1044 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 RING1Q06587 406 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 UVSSAQ2YD98 709 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 TMEM67Q5HYA8 995 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 ZBTB37Q5TC79 503 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 KIAA1211LQ6NV74 962 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 KIAA0907Q7Z7F0 614 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-212ENST00000473961 JMYQ8N9B5 988 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 GALNT11Q8NCW6 608 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 MICAL1Q8TDZ2 1067 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 ACSF2Q96CM8 615 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-212ENST00000473961 WDR89Q96FK6 387 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-212ENST00000473961 SGSM3Q96HU1 749 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 TMEM87BQ96K49 555 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 CCDC74BQ96LY2 380 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.99□□□□□ -1.45
BRCA1-212ENST00000473961 SSU72Q9NP77 194 aaKnown RBP5.99□□□□□ -1.45
BRCA1-212ENST00000473961 CRIM1Q9NZV1 1036 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 CCDC39Q9UFE4 941 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 PFDN2Q9UHV9 154 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 ZMYM5Q9UJ78 669 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 ZNF214Q9UL59 606 aaPredicted RBP5.99□□□□□ -1.45
BRCA1-212ENST00000473961 AP4E1Q9UPM8 1137 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 PCDHGC5Q9Y5F6 944 aa5.99□□□□□ -1.45
BRCA1-212ENST00000473961 B2RBV5 119 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 PRRG2O14669 202 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 TMPRSS2O15393 492 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 SUSD5O60279 629 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 ADAM11O75078 769 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 CTSBP07858 339 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 MSMPQ1L6U9 139 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 PPM1JQ5JR12 505 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 FDX2Q6P4F2 183 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 FAM46AQ96IP4 442 aaKnown RBP5.98□□□□□ -1.45
BRCA1-212ENST00000473961 SLC9A7Q96T83 725 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 SPATA9Q9BWV2 254 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 SUGCTQ9HAC7 445 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 IFT57Q9NWB7 429 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 COL4A3BPQ9Y5P4 624 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 PTCH2Q9Y6C5 1203 aa5.98□□□□□ -1.45
BRCA1-212ENST00000473961 ANKRD34BA5PLL1 514 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 CHURC1-FNTBB4DL54 471 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 RGS13O14921 159 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 DDX3YO15523 660 aaKnown RBP5.97□□□□□ -1.45
BRCA1-212ENST00000473961 CLEC3AO75596 197 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 WISP1O95388 367 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 ACRP10323 421 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 PMS1P54277 932 aaKnown RBP5.97□□□□□ -1.45
BRCA1-212ENST00000473961 ACAD11Q709F0 780 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 SPATC1Q76KD6 591 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 SMG8Q8ND04 991 aaKnown RBP5.97□□□□□ -1.45
BRCA1-212ENST00000473961 MYRFLQ96LU7 910 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 TMPRSS13Q9BYE2 586 aa5.97□□□□□ -1.45
BRCA1-212ENST00000473961 METTL14Q9HCE5 456 aaKnown RBP5.97□□□□□ -1.45
BRCA1-212ENST00000473961 UPK3BL1B0FP48 263 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 UPK3BL2E5RIL1 263 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 PAPLNO95428 1278 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 PRNPP04156 253 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 ADH5P11766 374 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 CAP2P40123 477 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 GYS2P54840 703 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 SQSTM1Q13501 440 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 ZYXQ15942 572 aaKnown RBP5.96□□□□□ -1.46
BRCA1-212ENST00000473961 ANKRD34AQ69YU3 496 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 MRM1Q6IN84 353 aaKnown RBP5.96□□□□□ -1.46
BRCA1-212ENST00000473961 CRACR2BQ8N4Y2 399 aaPredicted RBP5.96□□□□□ -1.46
BRCA1-212ENST00000473961 UBASH3BQ8TF42 649 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 CYB5D2Q8WUJ1 264 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 SLC6A18Q96N87 628 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 FANCD2OSQ96PS1 177 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 APBA2Q99767 749 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 YIPF2Q9BWQ6 316 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 CEP41Q9BYV8 373 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 GBP3Q9H0R5 595 aa5.96□□□□□ -1.46
BRCA1-212ENST00000473961 LRP2BPQ9P2M1 347 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms