RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 E7EWF7 191 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 SLC27A2O14975 620 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 NMT2O60551 498 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 TLR2O60603 784 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 IQCA1Q86XH1 822 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 SPICE1Q8N0Z3 855 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 LPAR1Q92633 364 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 ASCC2Q9H1I8 757 aaPredicted RBP14.64□□□□□ -0.07
DDX56-209ENST00000473924 R3HDMLQ9H3Y0 253 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 RPAP3Q9H6T3 665 aaPredicted RBP14.64□□□□□ -0.07
DDX56-209ENST00000473924 IL17RBQ9NRM6 502 aa14.64□□□□□ -0.07
DDX56-209ENST00000473924 USP17L15C9J2P7 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 USP17L13C9JLJ4 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 USP17L11C9JVI0 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 USP17L18D6R9N7 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 USP17L22D6RA61 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 USP17L17D6RBQ6 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 USP17L19D6RCP7 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 USP17L20D6RJB6 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 GPR25O00155 361 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 HOXA7P31268 230 aaPredicted RBP14.63□□□□□ -0.07
DDX56-209ENST00000473924 USP17L24Q0WX57 530 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 NECTIN1Q15223 517 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 CCDC178Q5BJE1 867 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 CREB3L3Q68CJ9 461 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 LRRC47Q8N1G4 583 aaKnown RBP14.63□□□□□ -0.07
DDX56-209ENST00000473924 NCOA7Q8NI08 942 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 MKL1Q969V6 931 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 ZKSCAN3Q9BRR0 538 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 TANGO6Q9C0B7 1094 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 TCP11L1Q9NUJ3 509 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 ZSWIM5Q9P217 1185 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 SYNPO2Q9UMS6 1093 aa14.63□□□□□ -0.07
DDX56-209ENST00000473924 MYH4Q9Y623 1939 aa14.62□□□□□ -0.07
DDX56-209ENST00000473924 F5H6K3 240 aa14.62□□□□□ -0.07
DDX56-209ENST00000473924 ZKSCAN1P17029 563 aaPredicted RBP14.62□□□□□ -0.07
DDX56-209ENST00000473924 KLRC3Q07444 240 aa14.62□□□□□ -0.07
DDX56-209ENST00000473924 KIAA1755Q5JYT7 1200 aa14.62□□□□□ -0.07
DDX56-209ENST00000473924 UBAC1Q9BSL1 405 aa14.62□□□□□ -0.07
DDX56-209ENST00000473924 CPA4Q9UI42 421 aa14.62□□□□□ -0.07
DDX56-209ENST00000473924 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
DDX56-209ENST00000473924 TAF6LQ9Y6J9 622 aa14.62□□□□□ -0.07
DDX56-209ENST00000473924 WDR46O15213 610 aaKnown RBP14.61□□□□□ -0.07
DDX56-209ENST00000473924 FKTNO75072 461 aa14.61□□□□□ -0.07
DDX56-209ENST00000473924 SP3Q02447 781 aa14.61□□□□□ -0.07
DDX56-209ENST00000473924 NOM1Q5C9Z4 860 aaKnown RBP14.61□□□□□ -0.07
DDX56-209ENST00000473924 CATSPERGQ6ZRH7 1159 aa14.61□□□□□ -0.07
DDX56-209ENST00000473924 NKX2-3Q8TAU0 364 aa14.61□□□□□ -0.07
DDX56-209ENST00000473924 ZNF296Q8WUU4 475 aaPredicted RBP14.61□□□□□ -0.07
DDX56-209ENST00000473924 TTC14Q96N46 770 aa14.61□□□□□ -0.07
DDX56-209ENST00000473924 ZSCAN10Q96SZ4 725 aaPredicted RBP14.61□□□□□ -0.07
DDX56-209ENST00000473924 P2RX7Q99572 595 aaKnown RBP14.61□□□□□ -0.07
DDX56-209ENST00000473924 PRDM10Q9NQV6 1147 aa14.61□□□□□ -0.07
DDX56-209ENST00000473924 MTMR7Q9Y216 660 aa14.61□□□□□ -0.07
DDX56-209ENST00000473924 ERICH2A1L162 156 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 EIF5BO60841 1220 aaKnown RBP14.6□□□□□ -0.07
DDX56-209ENST00000473924 NDUFB10O96000 172 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 TOP1P11387 765 aaKnown RBP14.6□□□□□ -0.07
DDX56-209ENST00000473924 GCLCP48506 637 aaPredicted RBP14.6□□□□□ -0.07
DDX56-209ENST00000473924 HERVK_113P62684 666 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 FAM83BQ5T0W9 1011 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 SLFN13Q68D06 897 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 SAMD1Q6SPF0 538 aaPredicted RBP14.6□□□□□ -0.07
DDX56-209ENST00000473924 C17orf99Q6UX52 265 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 STOX1Q6ZVD7 989 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 DGKHQ86XP1 1220 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 GMCL1P1Q8NEA9 526 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 CHMP4CQ96CF2 233 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 TNKSO95271 1327 aa14.6□□□□□ -0.07
DDX56-209ENST00000473924 FLOT1O75955 427 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 MCCP23508 829 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 COG2Q14746 738 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 KIF22Q14807 665 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 SART3Q15020 963 aaKnown RBP14.59□□□□□ -0.07
DDX56-209ENST00000473924 CYB5R4Q7L1T6 521 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 ANKRD13CQ8N6S4 541 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 GTF3C2Q8WUA4 911 aaPredicted RBP14.59□□□□□ -0.07
DDX56-209ENST00000473924 NUP88Q99567 741 aaPredicted RBP14.59□□□□□ -0.07
DDX56-209ENST00000473924 TMEM47Q9BQJ4 181 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 KAT14Q9H8E8 782 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 HOXC10Q9NYD6 342 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 ADGRA2Q96PE1 1338 aa14.59□□□□□ -0.07
DDX56-209ENST00000473924 IFIT3O14879 490 aaKnown RBP14.58□□□□□ -0.08
DDX56-209ENST00000473924 EPB41L2O43491 1005 aaKnown RBP14.58□□□□□ -0.08
DDX56-209ENST00000473924 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
DDX56-209ENST00000473924 HSPA4P34932 840 aa14.58□□□□□ -0.08
DDX56-209ENST00000473924 SLC1A4P43007 532 aa14.58□□□□□ -0.08
DDX56-209ENST00000473924 NOVP48745 357 aa14.58□□□□□ -0.08
DDX56-209ENST00000473924 KRT32Q14532 448 aa14.58□□□□□ -0.08
DDX56-209ENST00000473924 IFIT1BQ5T764 474 aaKnown RBP14.58□□□□□ -0.08
DDX56-209ENST00000473924 RCSD1Q6JBY9 416 aa14.58□□□□□ -0.08
DDX56-209ENST00000473924 CHST3Q7LGC8 479 aa14.58□□□□□ -0.08
DDX56-209ENST00000473924 ENAHQ8N8S7 591 aaPredicted RBP14.58□□□□□ -0.08
DDX56-209ENST00000473924 ERO1AQ96HE7 468 aa14.58□□□□□ -0.08
DDX56-209ENST00000473924 PAGR1Q9BTK6 254 aa14.58□□□□□ -0.08
DDX56-209ENST00000473924 CASP8AP2Q9UKL3 1982 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 BCRP11274 1271 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 BMP3P12645 472 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 MCM5P33992 734 aa14.57□□□□□ -0.08
DDX56-209ENST00000473924 IKQ13123 557 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms