RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 CCP110O43303 1012 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 PNMA6AP0CW24 399 aaPredicted RBP12.47□□□□□ -0.41
C9orf3-214ENST00000473778 PLA2G4AP47712 749 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 GNG11P61952 73 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 IL17AQ16552 155 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 CTR9Q6PD62 1173 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 RAD9BQ6WBX8 426 aa12.47□□□□□ -0.41
C9orf3-214ENST00000473778 PPP1R3GB7ZBB8 358 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 ZSCAN12O43309 604 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
C9orf3-214ENST00000473778 ERCC5P28715 1186 aaPredicted RBP12.46□□□□□ -0.41
C9orf3-214ENST00000473778 KRT2P35908 639 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 PBX1P40424 430 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 MAP3K9P80192 1104 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 RBL2Q08999 1139 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 IFIT1BQ5T764 474 aaKnown RBP12.46□□□□□ -0.41
C9orf3-214ENST00000473778 SRBD1Q8N5C6 995 aaKnown RBP12.46□□□□□ -0.41
C9orf3-214ENST00000473778 UBXN4Q92575 508 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 ADD3Q9UEY8 706 aaKnown RBP12.46□□□□□ -0.41
C9orf3-214ENST00000473778 MRFAP1Q9Y605 127 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 XDHP47989 1333 aa12.46□□□□□ -0.41
C9orf3-214ENST00000473778 CNTNAP5Q8WYK1 1306 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 ABL1P00519 1130 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 KCNQ4P56696 695 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 ERFEQ4G0M1 354 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 FAM84BQ96KN1 310 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-214ENST00000473778 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 SYNRGQ9UMZ2 1314 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 USP17L12C9JPN9 530 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 USP17L21D6R901 530 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 RNF225M0QZC1 329 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-214ENST00000473778 SASH3O75995 380 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 TFRCP02786 760 aaKnown RBP12.45□□□□□ -0.42
C9orf3-214ENST00000473778 FGRP09769 529 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 PTGDRQ13258 359 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 PARP10Q53GL7 1025 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 SLC51AQ86UW1 340 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
C9orf3-214ENST00000473778 CPLX3Q8WVH0 158 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 BLZF1Q9H2G9 400 aa12.45□□□□□ -0.42
C9orf3-214ENST00000473778 EFCAB8A8MWE9 144 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-214ENST00000473778 E2F4Q16254 413 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 FAM47AQ5JRC9 791 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 SPATA1Q5VX52 437 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 KANK3Q6NY19 840 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 TMTC3Q6ZXV5 915 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 MNS1Q8NEH6 495 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 CELF1Q92879 486 aaKnown RBP12.44□□□□□ -0.42
C9orf3-214ENST00000473778 DACH1Q9UI36 760 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 COL22A1Q8NFW1 1626 aaPredicted RBP12.44□□□□□ -0.42
C9orf3-214ENST00000473778 KCNQ2O43526 872 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 CYP2D6P10635 497 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 CDC25AP30304 524 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 FXR1P51114 621 aaKnown RBP eCLIP12.44□□□□□ -0.42
C9orf3-214ENST00000473778 SLC4A8Q2Y0W8 1093 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 IGSF22Q8N9C0 903 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 LZTFL1Q9NQ48 299 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 MINPP1Q9UNW1 487 aa12.44□□□□□ -0.42
C9orf3-214ENST00000473778 GYPCP04921 128 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 CASQ1P31415 396 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 ATP2C1P98194 919 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 AKAP17AQ02040 695 aaKnown RBP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 TTC38Q5R3I4 469 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 RSRC2Q7L4I2 434 aaKnown RBP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 CATIPQ7Z7H3 387 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 BRIP1Q9BX63 1249 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 ADGRG1Q9Y653 693 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 AKR1B15C9JRZ8 316 aaPredicted RBP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 CASP14P31944 242 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 CCT6AP40227 531 aaKnown RBP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 BMS1Q14692 1282 aaKnown RBP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 PDXDC2PQ6P474 469 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 PIK3AP1Q6ZUJ8 805 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 NSUN4Q96CB9 384 aaKnown RBP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 SRRTQ9BXP5 876 aaKnown RBP12.43□□□□□ -0.42
C9orf3-214ENST00000473778 CTNND2Q9UQB3 1225 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 JAG2Q9Y219 1238 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 KIAA1551Q9HCM1 1747 aa12.43□□□□□ -0.42
C9orf3-214ENST00000473778 LAMB1P07942 1786 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-214ENST00000473778 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 PRDX5P30044 214 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 MECOMQ03112 1051 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 PPP2R3AQ06190 1150 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 PPP2R5BQ15173 497 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 GSDMAQ96QA5 445 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 PANX2Q96RD6 677 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
C9orf3-214ENST00000473778 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 TBC1D8O95759 1140 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 MCM7P33993 719 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 UBE4AQ14139 1066 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 RCSD1Q6JBY9 416 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 IQCA1Q86XH1 822 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
C9orf3-214ENST00000473778 FERMT2Q96AC1 680 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms