RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 ARHGEF10LQ9HCE6 1279 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 IVNS1ABPQ9Y6Y0 642 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 GREB1LQ9C091 1923 aaPredicted RBP14.38□□□□□ -0.11
SMPD4-217ENST00000473720 TRIOBPQ9H2D6 2365 aa14.38□□□□□ -0.11
SMPD4-217ENST00000473720 GLRX3O76003 335 aaKnown RBP14.37□□□□□ -0.11
SMPD4-217ENST00000473720 CCND3P30281 292 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-217ENST00000473720 CDK8P49336 464 aa14.37□□□□□ -0.11
SMPD4-217ENST00000473720 FXR1P51114 621 aaKnown RBP eCLIP14.37□□□□□ -0.11
SMPD4-217ENST00000473720 ICA1Q05084 483 aa14.37□□□□□ -0.11
SMPD4-217ENST00000473720 CACNB2Q08289 660 aaPredicted RBP14.37□□□□□ -0.11
SMPD4-217ENST00000473720 PLS1Q14651 629 aa14.37□□□□□ -0.11
SMPD4-217ENST00000473720 UBE3CQ15386 1083 aa14.37□□□□□ -0.11
SMPD4-217ENST00000473720 MORN1Q5T089 497 aa14.37□□□□□ -0.11
SMPD4-217ENST00000473720 GPATCH3Q96I76 525 aa14.37□□□□□ -0.11
SMPD4-217ENST00000473720 APBA2Q99767 749 aa14.37□□□□□ -0.11
SMPD4-217ENST00000473720 ECHDC1Q9NTX5 307 aa14.37□□□□□ -0.11
SMPD4-217ENST00000473720 RBM27Q9P2N5 1060 aaKnown RBP14.37□□□□□ -0.11
SMPD4-217ENST00000473720 MCM3APO60318 1980 aa14.36□□□□□ -0.11
SMPD4-217ENST00000473720 XRCC5P13010 732 aaKnown RBP14.36□□□□□ -0.11
SMPD4-217ENST00000473720 MAP2K5Q13163 448 aa14.36□□□□□ -0.11
SMPD4-217ENST00000473720 KIAA1755Q5JYT7 1200 aa14.36□□□□□ -0.11
SMPD4-217ENST00000473720 C12orf60Q5U649 245 aa14.36□□□□□ -0.11
SMPD4-217ENST00000473720 TRMT44Q8IYL2 757 aaKnown RBP14.36□□□□□ -0.11
SMPD4-217ENST00000473720 C7orf61Q8IZ16 206 aa14.36□□□□□ -0.11
SMPD4-217ENST00000473720 USP6NLQ92738 828 aa14.36□□□□□ -0.11
SMPD4-217ENST00000473720 ZNF236Q9UL36 1845 aa14.36□□□□□ -0.11
SMPD4-217ENST00000473720 FLOT1O75955 427 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 PTPREP23469 700 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 CNGA1P29973 690 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 COG2Q14746 738 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 CTR9Q6PD62 1173 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 C16orf86Q6ZW13 317 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 NBPF3Q9H094 633 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 C11orf49Q9H6J7 331 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 DCTPP1Q9H773 170 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 FLRT1Q9NZU1 646 aa14.35□□□□□ -0.11
SMPD4-217ENST00000473720 SLC15A5A6NIM6 579 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 MINDY4BA8MYZ0 360 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 MAP3K21Q5TCX8 1036 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 LBX2Q6XYB7 198 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 ANKLE1Q8NAG6 615 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 NPLOC4Q8TAT6 608 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 VCPKMTQ9H867 229 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 HOXC10Q9NYD6 342 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 PCDH10Q9P2E7 1040 aa14.34□□□□□ -0.11
SMPD4-217ENST00000473720 ZMYND8Q9ULU4 1186 aaPredicted RBP14.34□□□□□ -0.11
SMPD4-217ENST00000473720 APPP05067 770 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
SMPD4-217ENST00000473720 SYN1P17600 705 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 CAPN2P17655 700 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 MFSD14CQ5VZR4 134 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 DPP9Q86TI2 863 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 NCAPG2Q86XI2 1143 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 SIAH1Q8IUQ4 282 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 KBTBD3Q8NAB2 608 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 OSBP2Q969R2 916 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 ATG4CQ96DT6 458 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 STRBPQ96SI9 672 aaKnown RBP14.33□□□□□ -0.12
SMPD4-217ENST00000473720 MOV10L1Q9BXT6 1211 aaKnown RBP14.33□□□□□ -0.12
SMPD4-217ENST00000473720 SPATC1LQ9H0A9 340 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 SH2D4AQ9H788 454 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 STAP2Q9UGK3 403 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 OGDHLQ9ULD0 1010 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 TMX2Q9Y320 296 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 PCDHB15Q9Y5E8 787 aa14.33□□□□□ -0.12
SMPD4-217ENST00000473720 RNF113AO15541 343 aaKnown RBP14.32□□□□□ -0.12
SMPD4-217ENST00000473720 ERCC3P19447 782 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 ADORA2AP29274 412 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 DSG3P32926 999 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 CYP2C19P33261 490 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 TDO2P48775 406 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 GRB14Q14449 540 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 APPBP2Q92624 585 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 LPAR1Q92633 364 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 MKNK2Q9HBH9 465 aa14.32□□□□□ -0.12
SMPD4-217ENST00000473720 ARPP21Q9UBL0 812 aaPredicted RBP14.32□□□□□ -0.12
SMPD4-217ENST00000473720 GSG1L2A8MUP6 293 aa14.31□□□□□ -0.12
SMPD4-217ENST00000473720 M0R2C6 588 aa14.31□□□□□ -0.12
SMPD4-217ENST00000473720 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-217ENST00000473720 OTUD7AQ8TE49 926 aaPredicted RBP14.31□□□□□ -0.12
SMPD4-217ENST00000473720 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
SMPD4-217ENST00000473720 KANSL2Q9H9L4 492 aa14.31□□□□□ -0.12
SMPD4-217ENST00000473720 GOPCQ9HD26 462 aa14.31□□□□□ -0.12
SMPD4-217ENST00000473720 FBXO28Q9NVF7 368 aa14.31□□□□□ -0.12
SMPD4-217ENST00000473720 WDR46O15213 610 aaKnown RBP14.3□□□□□ -0.12
SMPD4-217ENST00000473720 GPAA1O43292 621 aa14.3□□□□□ -0.12
SMPD4-217ENST00000473720 MYCNP04198 464 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-217ENST00000473720 FAM83BQ5T0W9 1011 aa14.3□□□□□ -0.12
SMPD4-217ENST00000473720 ANO1Q5XXA6 986 aa14.3□□□□□ -0.12
SMPD4-217ENST00000473720 LHX8Q68G74 356 aa14.3□□□□□ -0.12
SMPD4-217ENST00000473720 SEC62Q99442 399 aaKnown RBP14.3□□□□□ -0.12
SMPD4-217ENST00000473720 FSD1Q9BTV5 496 aa14.3□□□□□ -0.12
SMPD4-217ENST00000473720 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
SMPD4-217ENST00000473720 PFASO15067 1338 aa14.3□□□□□ -0.12
SMPD4-217ENST00000473720 ERC2O15083 957 aa14.29□□□□□ -0.12
SMPD4-217ENST00000473720 PRDM1O75626 825 aa14.29□□□□□ -0.12
SMPD4-217ENST00000473720 ZFYP08048 801 aaPredicted RBP14.29□□□□□ -0.12
SMPD4-217ENST00000473720 RASA1P20936 1047 aa14.29□□□□□ -0.12
SMPD4-217ENST00000473720 SLC4A3P48751 1232 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms