RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 ZBTB21Q9ULJ3 1066 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 STXBP5LQ9Y2K9 1186 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 PFASO15067 1338 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 LOC285556D6RIA3 1793 aa8.45□□□□□ -1.06
CKS1B-205ENST00000473344 PNMA6EA0A0J9YXQ4 647 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 HRO43593 1189 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 IGSF3O75054 1194 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 GH2P01242 217 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 CYP2E1P05181 493 aaPredicted RBP8.44□□□□□ -1.06
CKS1B-205ENST00000473344 CNGA1P29973 690 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 CCND3P30281 292 aaPredicted RBP8.44□□□□□ -1.06
CKS1B-205ENST00000473344 USP5P45974 858 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 USP14P54578 494 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 MDM2Q00987 491 aaPredicted RBP8.44□□□□□ -1.06
CKS1B-205ENST00000473344 RAB3GAP1Q15042 981 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 CCL14Q16627 93 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 Q3C1V9 767 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 TNNI3KQ59H18 835 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 MFSD14CQ5VZR4 134 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 METTL16Q86W50 562 aaKnown RBP8.44□□□□□ -1.06
CKS1B-205ENST00000473344 CERS3Q8IU89 383 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 CLUAP1Q96AJ1 413 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 PORCNQ9H237 461 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 DNAJC18Q9H819 358 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 GPR108Q9NPR9 543 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 PRKAG2Q9UGJ0 569 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 IVNS1ABPQ9Y6Y0 642 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 FPGT-TNNI3KV9GXZ4 949 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 PTPRFP10586 1907 aa8.44□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L15C9J2P7 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L13C9JLJ4 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L11C9JVI0 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L18D6R9N7 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L22D6RA61 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L17D6RBQ6 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L19D6RCP7 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L20D6RJB6 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 MSCO60682 206 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 SURF6O75683 361 aaKnown RBP8.43□□□□□ -1.06
CKS1B-205ENST00000473344 IDH1O75874 414 aaKnown RBP8.43□□□□□ -1.06
CKS1B-205ENST00000473344 COL6A1P12109 1028 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 TRIM27P14373 513 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 CYP7A1P22680 504 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 JAG1P78504 1218 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 ATP2B2Q01814 1243 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP17L24Q0WX57 530 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 MAP2K5Q13163 448 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 LRRC26Q2I0M4 334 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 SHROOM1Q2M3G4 852 aaPredicted RBP8.43□□□□□ -1.06
CKS1B-205ENST00000473344 MORN1Q5T089 497 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 ADGRA1Q86SQ6 560 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 USP6NLQ92738 828 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 DBNDD2Q9BQY9 259 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 SENP6Q9GZR1 1112 aaPredicted RBP8.43□□□□□ -1.06
CKS1B-205ENST00000473344 CABP5Q9NP86 173 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 EMILIN3Q9NT22 766 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 MTMR10Q9NXD2 777 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 SERPINB13Q9UIV8 391 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 RABGAP1Q9Y3P9 1069 aa8.43□□□□□ -1.06
CKS1B-205ENST00000473344 DDX60LQ5H9U9 1706 aaKnown RBP8.43□□□□□ -1.06
CKS1B-205ENST00000473344 PTPREP23469 700 aa8.42□□□□□ -1.06
CKS1B-205ENST00000473344 ZAP70P43403 619 aa8.42□□□□□ -1.06
CKS1B-205ENST00000473344 DYNLL1P63167 89 aaKnown RBP8.42□□□□□ -1.06
CKS1B-205ENST00000473344 CERKLQ49MI3 558 aaPredicted RBP8.42□□□□□ -1.06
CKS1B-205ENST00000473344 TTC6Q86TZ1 520 aa8.42□□□□□ -1.06
CKS1B-205ENST00000473344 MIGA1Q8NAN2 632 aa8.42□□□□□ -1.06
CKS1B-205ENST00000473344 ZNF512BQ96KM6 892 aaPredicted RBP8.42□□□□□ -1.06
CKS1B-205ENST00000473344 C12orf42Q96LP6 360 aa8.42□□□□□ -1.06
CKS1B-205ENST00000473344 DDX20Q9UHI6 824 aaKnown RBP8.42□□□□□ -1.06
CKS1B-205ENST00000473344 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
CKS1B-205ENST00000473344 ATAD5Q96QE3 1844 aa8.42□□□□□ -1.06
CKS1B-205ENST00000473344 CDH23Q9H251 3354 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 SLC15A5A6NIM6 579 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 DNM1LO00429 736 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 VCAM1P19320 739 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 MAP3K12Q12852 859 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 DSG2Q14126 1118 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 ABCB5Q2M3G0 1257 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 TATDN1Q6P1N9 297 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 CATSPERGQ6ZRH7 1159 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 DPP9Q86TI2 863 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 MAGEB6Q8N7X4 407 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 LPAR1Q92633 364 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 FAM161BQ96MY7 647 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 KIAA1683Q9H0B3 1180 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 EHD4Q9H223 541 aa8.41□□□□□ -1.06
CKS1B-205ENST00000473344 PIH1D3Q9NQM4 214 aaKnown RBP8.41□□□□□ -1.06
CKS1B-205ENST00000473344 RBM19Q9Y4C8 960 aaKnown RBP8.41□□□□□ -1.06
CKS1B-205ENST00000473344 MPHOSPH10O00566 681 aaKnown RBP8.4□□□□□ -1.06
CKS1B-205ENST00000473344 BCAR3O75815 825 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 POLR3DP05423 398 aaPredicted RBP8.4□□□□□ -1.06
CKS1B-205ENST00000473344 CYP2C19P33261 490 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 GRB14Q14449 540 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 ZNF697Q5TEC3 545 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 ZKSCAN2Q63HK3 967 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.4□□□□□ -1.06
CKS1B-205ENST00000473344 FTSJ3Q8IY81 847 aaKnown RBP8.4□□□□□ -1.06
CKS1B-205ENST00000473344 TMEM57Q8N5G2 664 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 ARRDC4Q8NCT1 418 aa8.4□□□□□ -1.06
CKS1B-205ENST00000473344 CCDC8Q9H0W5 538 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms