RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 COLQQ9Y215 455 aaPredicted RBP15.58■□□□□ 0.08
TPM3-216ENST00000473036 SLC45A1Q9Y2W3 748 aa15.58■□□□□ 0.08
TPM3-216ENST00000473036 PLIN4Q96Q06 1357 aa15.58■□□□□ 0.08
TPM3-216ENST00000473036 PARP14Q460N5 1801 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 ORC4O43929 436 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 BCRP11274 1271 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 LACTBP83111 547 aaPredicted RBP15.57■□□□□ 0.08
TPM3-216ENST00000473036 TFAP4Q01664 338 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 PDE4BQ07343 736 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 USP17L2Q6R6M4 530 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 ZNF444Q8N0Y2 327 aaPredicted RBP15.57■□□□□ 0.08
TPM3-216ENST00000473036 NEDD1Q8NHV4 660 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 CEP95Q96GE4 821 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 CPA4Q9UI42 421 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 TMX2Q9Y320 296 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 NEDD4P46934 1319 aa15.57■□□□□ 0.08
TPM3-216ENST00000473036 VCAM1P19320 739 aa15.56■□□□□ 0.08
TPM3-216ENST00000473036 HOXA7P31268 230 aaPredicted RBP15.56■□□□□ 0.08
TPM3-216ENST00000473036 COL9A3Q14050 684 aaPredicted RBP15.56■□□□□ 0.08
TPM3-216ENST00000473036 STAG1Q8WVM7 1258 aa15.56■□□□□ 0.08
TPM3-216ENST00000473036 MAP4K1Q92918 833 aa15.56■□□□□ 0.08
TPM3-216ENST00000473036 P2RX7Q99572 595 aaKnown RBP15.56■□□□□ 0.08
TPM3-216ENST00000473036 ASCC2Q9H1I8 757 aaPredicted RBP15.56■□□□□ 0.08
TPM3-216ENST00000473036 KANSL2Q9H9L4 492 aa15.56■□□□□ 0.08
TPM3-216ENST00000473036 MTMR4Q9NYA4 1195 aa15.56■□□□□ 0.08
TPM3-216ENST00000473036 DOCK3Q8IZD9 2030 aa15.56■□□□□ 0.08
TPM3-216ENST00000473036 RANBP2P49792 3224 aaKnown RBP15.55■□□□□ 0.08
TPM3-216ENST00000473036 ZNF213O14771 459 aa15.55■□□□□ 0.08
TPM3-216ENST00000473036 HOXD10P28358 340 aa15.55■□□□□ 0.08
TPM3-216ENST00000473036 NOVP48745 357 aa15.55■□□□□ 0.08
TPM3-216ENST00000473036 AKNAD1Q5T1N1 836 aa15.55■□□□□ 0.08
TPM3-216ENST00000473036 RUFY2Q8WXA3 655 aa15.55■□□□□ 0.08
TPM3-216ENST00000473036 FEZ1Q99689 392 aa15.55■□□□□ 0.08
TPM3-216ENST00000473036 ARHGAP39Q9C0H5 1083 aa15.55■□□□□ 0.08
TPM3-216ENST00000473036 TMOD4Q9NZQ9 345 aa15.55■□□□□ 0.08
TPM3-216ENST00000473036 SLC3A2P08195 630 aaKnown RBP15.54■□□□□ 0.08
TPM3-216ENST00000473036 CYP21A2P08686 494 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 ATP2B2Q01814 1243 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 CATSPERGQ6ZRH7 1159 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 STOX1Q6ZVD7 989 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 RASGRP2Q7LDG7 609 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 SPICE1Q8N0Z3 855 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 MKL1Q969V6 931 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 PARK7Q99497 189 aaKnown RBP15.54■□□□□ 0.08
TPM3-216ENST00000473036 VCPKMTQ9H867 229 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 TXNRD2Q9NNW7 524 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 NYAP2Q9P242 653 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 CLIP2Q9UDT6 1046 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 MGAMO43451 1857 aa15.54■□□□□ 0.08
TPM3-216ENST00000473036 TRIOBPQ9H2D6 2365 aa15.53■□□□□ 0.08
TPM3-216ENST00000473036 H0YGN5 161 aa15.53■□□□□ 0.08
TPM3-216ENST00000473036 RANBP6O60518 1105 aaKnown RBP15.53■□□□□ 0.08
TPM3-216ENST00000473036 CDC45O75419 566 aa15.53■□□□□ 0.08
TPM3-216ENST00000473036 TSPY3P0CV98 308 aa15.53■□□□□ 0.08
TPM3-216ENST00000473036 TSPY8P0CW00 308 aa15.53■□□□□ 0.08
TPM3-216ENST00000473036 USP14P54578 494 aa15.53■□□□□ 0.08
TPM3-216ENST00000473036 RRP12Q5JTH9 1297 aaKnown RBP15.53■□□□□ 0.08
TPM3-216ENST00000473036 LRRC47Q8N1G4 583 aaKnown RBP15.53■□□□□ 0.08
TPM3-216ENST00000473036 RPAP3Q9H6T3 665 aaPredicted RBP15.53■□□□□ 0.08
TPM3-216ENST00000473036 ZNF287Q9HBT7 754 aa15.53■□□□□ 0.08
TPM3-216ENST00000473036 ARHGEF10LQ9HCE6 1279 aa15.53■□□□□ 0.08
TPM3-216ENST00000473036 RBM8AQ9Y5S9 174 aaKnown RBP15.53■□□□□ 0.08
TPM3-216ENST00000473036 SZT2Q5T011 3432 aa15.52■□□□□ 0.08
TPM3-216ENST00000473036 CNMDO75829 334 aa15.52■□□□□ 0.08
TPM3-216ENST00000473036 ECM2O94769 699 aaPredicted RBP15.52■□□□□ 0.08
TPM3-216ENST00000473036 HERVK_113P62684 666 aa15.52■□□□□ 0.08
TPM3-216ENST00000473036 RCSD1Q6JBY9 416 aa15.52■□□□□ 0.08
TPM3-216ENST00000473036 MFSD6Q6ZSS7 791 aa15.52■□□□□ 0.08
TPM3-216ENST00000473036 NUP88Q99567 741 aaPredicted RBP15.52■□□□□ 0.08
TPM3-216ENST00000473036 HTATIP2Q9BUP3 242 aa15.52■□□□□ 0.08
TPM3-216ENST00000473036 RBPJLQ9UBG7 517 aa15.52■□□□□ 0.08
TPM3-216ENST00000473036 A0A0G2JMZ2 1700 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 TSPY2A6NKD2 308 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 B4E1Z4 1266 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L15C9J2P7 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L13C9JLJ4 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L11C9JVI0 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L18D6R9N7 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L22D6RA61 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L17D6RBQ6 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L19D6RCP7 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L20D6RJB6 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 F5H6K3 240 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 TTLL1O95922 423 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 NDUFB10O96000 172 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 KLRC3Q07444 240 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 USP17L24Q0WX57 530 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 IMMTQ16891 758 aaKnown RBP15.51■□□□□ 0.07
TPM3-216ENST00000473036 Q3C1V9 767 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 ANKRD13CQ8N6S4 541 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 SH3TC2Q8TF17 1288 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 ZKSCAN3Q9BRR0 538 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 FBXO28Q9NVF7 368 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 SRRDQ9UH36 339 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 CTNNA3Q9UI47 895 aa15.51■□□□□ 0.07
TPM3-216ENST00000473036 COL11A1P12107 1806 aaPredicted RBP15.51■□□□□ 0.07
TPM3-216ENST00000473036 A0A1W2PPC1 479 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 SPDYE16A6NNV3 312 aaPredicted RBP15.5■□□□□ 0.07
TPM3-216ENST00000473036 KDM4AO75164 1064 aa15.5■□□□□ 0.07
TPM3-216ENST00000473036 GJB1P08034 283 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms