RNA–Protein interactions for RNA: ENST00000472800.1

AUP1-207, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

TSL 4

Gene AUP1, Length 663 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-207ENST00000472800 ANKRD23Q86SG2 305 aa23.18■■□□□ 1.3
AUP1-207ENST00000472800 IFNL1Q8IU54 200 aa23.18■■□□□ 1.3
AUP1-207ENST00000472800 C12orf42Q96LP6 360 aa23.18■■□□□ 1.3
AUP1-207ENST00000472800 MTA3Q9BTC8 594 aa23.18■■□□□ 1.3
AUP1-207ENST00000472800 SLC45A1Q9Y2W3 748 aa23.18■■□□□ 1.3
AUP1-207ENST00000472800 TAF6LQ9Y6J9 622 aa23.18■■□□□ 1.3
AUP1-207ENST00000472800 HMGCS2P54868 508 aa23.17■■□□□ 1.3
AUP1-207ENST00000472800 ATP2B2Q01814 1243 aa23.17■■□□□ 1.3
AUP1-207ENST00000472800 DGKHQ86XP1 1220 aa23.17■■□□□ 1.3
AUP1-207ENST00000472800 ANKS1AQ92625 1134 aa23.17■■□□□ 1.3
AUP1-207ENST00000472800 LPAR1Q92633 364 aa23.17■■□□□ 1.3
AUP1-207ENST00000472800 PTPN18Q99952 460 aa23.17■■□□□ 1.3
AUP1-207ENST00000472800 GREB1LQ9C091 1923 aaPredicted RBP23.17■■□□□ 1.3
AUP1-207ENST00000472800 PABPC4Q13310 644 aaKnown RBP eCLIP23.16■■□□□ 1.3
AUP1-207ENST00000472800 GADL1Q6ZQY3 521 aa23.16■■□□□ 1.3
AUP1-207ENST00000472800 RASEFQ8IZ41 740 aa23.16■■□□□ 1.3
AUP1-207ENST00000472800 VCPKMTQ9H867 229 aa23.16■■□□□ 1.3
AUP1-207ENST00000472800 GOPCQ9HD26 462 aa23.16■■□□□ 1.3
AUP1-207ENST00000472800 EMILIN3Q9NT22 766 aa23.16■■□□□ 1.3
AUP1-207ENST00000472800 STX8Q9UNK0 236 aa23.16■■□□□ 1.3
AUP1-207ENST00000472800 AGTPBP1Q9UPW5 1226 aa23.16■■□□□ 1.3
AUP1-207ENST00000472800 BTBD19C9JJ37 291 aa23.15■■□□□ 1.3
AUP1-207ENST00000472800 HMGB1P09429 215 aaKnown RBP23.15■■□□□ 1.3
AUP1-207ENST00000472800 GPAT2Q6NUI2 795 aa23.15■■□□□ 1.3
AUP1-207ENST00000472800 CLEC10AQ8IUN9 316 aa23.15■■□□□ 1.3
AUP1-207ENST00000472800 NEK1Q96PY6 1258 aa23.15■■□□□ 1.3
AUP1-207ENST00000472800 ZSCAN10Q96SZ4 725 aaPredicted RBP23.15■■□□□ 1.3
AUP1-207ENST00000472800 UBAC1Q9BSL1 405 aa23.15■■□□□ 1.3
AUP1-207ENST00000472800 TNRC18O15417 2968 aaPredicted RBP23.14■■□□□ 1.3
AUP1-207ENST00000472800 IGF2BP3O00425 579 aaKnown RBP eCLIP23.14■■□□□ 1.29
AUP1-207ENST00000472800 NMT2O60551 498 aa23.14■■□□□ 1.29
AUP1-207ENST00000472800 TOP1P11387 765 aaKnown RBP23.14■■□□□ 1.29
AUP1-207ENST00000472800 HOXA7P31268 230 aaPredicted RBP23.14■■□□□ 1.29
AUP1-207ENST00000472800 MCM5P33992 734 aa23.14■■□□□ 1.29
AUP1-207ENST00000472800 SART3Q15020 963 aaKnown RBP23.14■■□□□ 1.29
AUP1-207ENST00000472800 MB21D2Q8IYB1 491 aaPredicted RBP23.14■■□□□ 1.29
AUP1-207ENST00000472800 NKX2-3Q8TAU0 364 aa23.14■■□□□ 1.29
AUP1-207ENST00000472800 SNX14Q9Y5W7 946 aa23.14■■□□□ 1.29
AUP1-207ENST00000472800 ERICH2A1L162 156 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 SEC24BO95487 1268 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 TBC1D8O95759 1140 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 PSMA5P28066 241 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 ANAPC15P60006 121 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 CYB5R4Q7L1T6 521 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 FAM43AQ8N2R8 423 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 GMCL1P1Q8NEA9 526 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 CFHR5Q9BXR6 569 aa23.13■■□□□ 1.29
AUP1-207ENST00000472800 F5H6K3 240 aa23.12■■□□□ 1.29
AUP1-207ENST00000472800 KLRC3Q07444 240 aa23.12■■□□□ 1.29
AUP1-207ENST00000472800 ZYXQ15942 572 aaKnown RBP23.12■■□□□ 1.29
AUP1-207ENST00000472800 RCSD1Q6JBY9 416 aa23.12■■□□□ 1.29
AUP1-207ENST00000472800 TMEM47Q9BQJ4 181 aa23.12■■□□□ 1.29
AUP1-207ENST00000472800 ZKSCAN3Q9BRR0 538 aa23.12■■□□□ 1.29
AUP1-207ENST00000472800 WDR19Q8NEZ3 1342 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L15C9J2P7 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L13C9JLJ4 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L11C9JVI0 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L18D6R9N7 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L22D6RA61 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L17D6RBQ6 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L19D6RCP7 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L20D6RJB6 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 PDHXO00330 501 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 WDR46O15213 610 aaKnown RBP23.11■■□□□ 1.29
AUP1-207ENST00000472800 OSBPP22059 807 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 USP17L24Q0WX57 530 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 DHX32Q7L7V1 743 aaKnown RBP23.11■■□□□ 1.29
AUP1-207ENST00000472800 TMTC2Q8N394 836 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 ENAHQ8N8S7 591 aaPredicted RBP23.11■■□□□ 1.29
AUP1-207ENST00000472800 ZNF296Q8WUU4 475 aaPredicted RBP23.11■■□□□ 1.29
AUP1-207ENST00000472800 TMEM87BQ96K49 555 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 PNMA3Q9UL41 463 aa23.11■■□□□ 1.29
AUP1-207ENST00000472800 TNKSO95271 1327 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 IFIT3O14879 490 aaKnown RBP23.1■■□□□ 1.29
AUP1-207ENST00000472800 VCAM1P19320 739 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 SEC23AQ15436 765 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 ADCK5Q3MIX3 580 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 TREML2Q5T2D2 321 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 TM6SF1Q9BZW5 370 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 ZFYVE28Q9HCC9 887 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 HPS5Q9UPZ3 1129 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 PTPRFP10586 1907 aa23.1■■□□□ 1.29
AUP1-207ENST00000472800 PRC1O43663 620 aa23.09■■□□□ 1.29
AUP1-207ENST00000472800 EXOSC10Q01780 885 aaKnown RBP23.09■■□□□ 1.29
AUP1-207ENST00000472800 PKN2Q16513 984 aaKnown RBP23.09■■□□□ 1.29
AUP1-207ENST00000472800 IFIT1BQ5T764 474 aaKnown RBP23.09■■□□□ 1.29
AUP1-207ENST00000472800 LRRC47Q8N1G4 583 aaKnown RBP23.09■■□□□ 1.29
AUP1-207ENST00000472800 IGDCC4Q8TDY8 1250 aa23.09■■□□□ 1.29
AUP1-207ENST00000472800 IL17RAQ96F46 866 aa23.09■■□□□ 1.29
AUP1-207ENST00000472800 NDUFB10O96000 172 aa23.08■■□□□ 1.29
AUP1-207ENST00000472800 ANTXR2P58335 489 aa23.08■■□□□ 1.29
AUP1-207ENST00000472800 TAF1CQ15572 869 aaPredicted RBP23.08■■□□□ 1.29
AUP1-207ENST00000472800 SLFN13Q68D06 897 aa23.08■■□□□ 1.29
AUP1-207ENST00000472800 CATSPERGQ6ZRH7 1159 aa23.08■■□□□ 1.29
AUP1-207ENST00000472800 GMCL1Q96IK5 515 aa23.08■■□□□ 1.29
AUP1-207ENST00000472800 JAKMIP1Q96N16 626 aaKnown RBP23.08■■□□□ 1.29
AUP1-207ENST00000472800 PARK7Q99497 189 aaKnown RBP23.08■■□□□ 1.29
AUP1-207ENST00000472800 RPAP3Q9H6T3 665 aaPredicted RBP23.08■■□□□ 1.29
AUP1-207ENST00000472800 KAT14Q9H8E8 782 aa23.08■■□□□ 1.29
AUP1-207ENST00000472800 UPF2Q9HAU5 1272 aaKnown RBP23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms